Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01811 ATGGCGGGAACTCACGTTTTTCGCCGTTTTCCTCCATTCTTGCCGATTCCTTTTCCCCTTTCCTCGTTAACGGTTTCTCTGATTGAGGGACTGAGGCTTTATATCCCAATGCCGCTTTTGAGGAGAAAGCCTTTTGCCCTGGCTGAGCCACCTAATGATTTGGAGCCATGCGAGAGTCTTTTTCAAATTCGATTTACTAAAGAAATATTTCGAGATTATAATGATTATTTGAACCGTTTAAATCAATACCGCCAGAGGTTTTGGACGTGCAAAGTAACTGGTAAAACTGGCTTGACTTATGAAGAGGCTCTGGTGTCAGAGATGCATGCCACTGAGAAAGTCCAACAGATTCCGGAAGAATTAATGGCACCTGCACTTAGGATTATTCAGTACAGCATGCTCCCTTTGAAGGATCTTGTTGATTCTATTGCTGAAAAGTTGAAGGAGCAGTTGTTTGTGGGCTCTCAATTGTATGGAAAAAAAAATGACAGAGTGTGTCCTTGCAAAATATTGAAAGTGATGCAGGAAGATCCTGAAAATGTCAGCTATGTGGTGGCTTGGCTTGATGAGAGCAATAATGTTATTGAAAGAGCAGAAGTCAGTTCTCAAGATTTGGTGCAGCAGAAGCGACCTTTTAGTAGAAATATCTTGAAGTCTTTTGTCCGTGGATGTACTAATCGAAATGCTCCTTGGGTTTTACACGATAAACTTGCAAAAAAACATGGAATCTCAACTGACATTCCAGAGGAGTTAAGAGGAAAGGTTTCCTTTAACAATGGACTTGTGGTCTTCACCAAAAAAAGAAAGCATGAGGAAGAGTCAATCCAATATCCAATTGATGATCTATTAGTGAAGCCTAGTCCAGATGATCCTGTTTTCAGTAGTCGTCCTTCTCCATCAAGAGACTTTAATGTTCCTATTTATTGTGTAGGGGATCTCTTAATGGTTTGGGATTTTTTTATGTCTTTTGGTAAACTGTTACGATTGTCTCCTTACTCTCTCAAAGATTTTGAAAATGCAATCAGTCACAAGGATAGCAATGTAGCTCTCCTAGTGGAATCTCATGCAGTACTCTTTCGAGTGCTCATCAAAGGTGATGATGAATACCATGCAGCTGTTCAAGACAAATTACCGAAGAAGATTACAATGATTAGTTGGAAAGAGTACTTATGTGAGTTTTTAGAAATGATCAAAATTCCCAAGCTGCGGCAGTATGAAGCAACAATTAAACGGGGACATTATGGTTATGTTGATGTCAATGCTAAATTAGAAATCTTTTGCGAATTAGTCAATCGGGCCCTTGATACTGCTATTGTCAGGGGAAAATTGGATGAGTTTATTAAACAAAGGCGGGTACTGGGGGCTGCCAAAAGGGAAGAAGCTATTGAAGCTTCTGCGAAGAGAAGAAAAGTAAAGGAGCAGTTGAAAGCTGATTCTGGAAGCAACTGTGGTGAAAATTGGCATCATCTTGATCAGGATGCAACTGTGTCAACAGATAATAATAATCACAGAATACAGAATGGTAGTATTGGAAAGAATAGAAACAAAGAGATAGAATCATCTTGGCAAAAAGATGAATGGGATAGTGGTATCAAGCATTCAAAGCTTGCTTCAAAAATATCAGCTGAAGAGCTGAATCGATCTGCAGAATTCGGAAAAGTATACAGAAAGGAATCACTGAAACAACCAAAGGGTGATAAGGATCAATCAGAGAAAAACTACGAACAAAGGAGAGAATATTTTGATCGGGAGATAGAGAAATGGTGTATTCGTACAAGTTTTCTAGGTATGGACAGATATTATAATAGGTATTGGTGGTTTTACCGTGATGGAAGGATATTTGTTGAAAGTCCTGAATCCAAGGAGTGGGGATACTACAGTAGCAAGGGAGAGCTTGATGGATTGACGACTTCACTGAATTGCAAAGGTGAGAGGGAAAGGGCACTGCTAAAACAACTGAAAAAATATTATAGTAGAATATGCTCAGAATTGCAGAAAAATTCAAAGGATTTGTTGCATAATATTGCCCTGGATGATTCTGTGGTGAGAAGGTCTACTCGTGTTCGCGCACCACCTAGGGAGAATCCTGCCAAAGCTTTCCTTAGATATGTAAACAAGTGGAAAGAAGAGTAA 2133 0.3943 MAGTHVFRRFPPFLPIPFPLSSLTVSLIEGLRLYIPMPLLRRKPFALAEPPNDLEPCESLFQIRFTKEIFRDYNDYLNRLNQYRQRFWTCKVTGKTGLTYEEALVSEMHATEKVQQIPEELMAPALRIIQYSMLPLKDLVDSIAEKLKEQLFVGSQLYGKKNDRVCPCKILKVMQEDPENVSYVVAWLDESNNVIERAEVSSQDLVQQKRPFSRNILKSFVRGCTNRNAPWVLHDKLAKKHGISTDIPEELRGKVSFNNGLVVFTKKRKHEEESIQYPIDDLLVKPSPDDPVFSSRPSPSRDFNVPIYCVGDLLMVWDFFMSFGKLLRLSPYSLKDFENAISHKDSNVALLVESHAVLFRVLIKGDDEYHAAVQDKLPKKITMISWKEYLCEFLEMIKIPKLRQYEATIKRGHYGYVDVNAKLEIFCELVNRALDTAIVRGKLDEFIKQRRVLGAAKREEAIEASAKRRKVKEQLKADSGSNCGENWHHLDQDATVSTDNNNHRIQNGSIGKNRNKEIESSWQKDEWDSGIKHSKLASKISAEELNRSAEFGKVYRKESLKQPKGDKDQSEKNYEQRREYFDREIEKWCIRTSFLGMDRYYNRYWWFYRDGRIFVESPESKEWGYYSSKGELDGLTTSLNCKGERERALLKQLKKYYSRICSELQKNSKDLLHNIALDDSVVRRSTRVRAPPRENPAKAFLRYVNKWKEE 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01811 710 ProSiteProfiles DDT domain profile. 307 368 IPR018501 -
Phco7g01811 710 Pfam DDT domain 309 364 IPR018501 -
Phco7g01811 710 MobiDBLite consensus disorder prediction 556 575 - -
Phco7g01811 710 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 268 708 - -
Phco7g01811 710 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 590 656 IPR028941 -
Phco7g01811 710 SMART testlast3 307 368 IPR018501 -
Phco7g01811 710 ProSiteProfiles WAC domain profile. 58 164 IPR013136 -
Phco7g01811 710 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 60 156 IPR013136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01811 Phco-Chr7 18895716 18900863 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Phco7g01811 WAC_Acf1_DNA_bd 1.8e-29 No_clan