Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01775 ATGGAGTCTGAATTTTACTGTGAAGAAGGAATCAACTTGTGTTCTGAAAACGCAAAGCTGTCTTTATCAAGAGTGGACTCTGCAGTACAGTGCACAGTACCTGCATGCGTCTTGCCACACACTATAAGCACTTTGACGATTCAGCATTCGCCACGTCATCAAGTTCGACACCACGGTCCTCGAGCACGATTCGTTCTCTCTCGCCATTCCCAAGATAAAGCAACCAACACGCAAGAGAGAGAGAGAAAAGGAAAAGGAAGAGAGAAAGACAGAGAAAGAGAGAGAAAGCGCGAGGAGAATAAGAATAAAAAAGCCACTCTTCCGATGAAGTTAATCGGCGACGGAGCCGATGGCCGGAAGGTACTCGTCGGAGTAAAATTAGATCCTAGCAGCCGCGAATTGCTGACGTGGGCGCTCGTCAAGGTGGCTGAGTCCGGGGACCTCGTCATTGCGCTTCACGTCCTCGACTCAATCACTGAGGGGACGGCATCGCTGTTATCTCTCGTGAAAACTTTCGACTCCGTTCTCGCCGTTTATGAAGGCTTCTGCAACCTAAAACAGGTTGGTCTGAGGCTTAAAGTGTGTCGCGGTGACTCGGTTCGGAAGGTTCTGGTGCAAGAGGCCAAGACGTTTGGAGTTTCCACCGTGATTTTGGGAACTTCTAAGTCTCATCACACTATTCGTTCTTCCGCGTGGGTTGCGAAGTACTGTGCGAAGAAATTGCCGAAGTGTATCTCTGTCTTCTCTGTAGATAATGGCAAAATTGCTTTCCGGAGAGAAGCAAATGGAAATTGTGGTGATCGAGAGAAATCACCCGAAGGGTCAAGTTTGTCGCCAAAGTCGTTGGTGGTTTATACAAACAAGAACATGAAGAGTTGTGGAAGTTGTGCATTGCAAGAGATTTCTGGGACTGTGTTTGAGCGAGGGTTGTGTGATGATGTTGAGAAGGGTGATTCGCTTGCTTTGGTTCCGTTTAAGAAACTTGATGATGGTCCTTGTTTTTCAGTTGTGGTGGATAACTCGAAGCATAAACCTGGCTGGTCACTGCTTCGCAATGTGTTTCATCACAAGAGGCATTCCTCAAAATCTTCCACGAAAAATACATATATTTTCCAAAGGGCGTTGCGGCAGCCGAATTATCATTCTTCTGCTGTAGTCCATCCGGATCATAAACATATTAGTATTGAGCAGATTGAGGATTCCCCTCTCGATGGGGTGAGTGGTGCCATTGTGCCATATGGATCTGCTACTATTGTTACCCTTCCCTCCATTTGCTATAAGTCGGGTAACATACCTGAGGAATTGTTGATATTACAAGAAAAGTACTCATCTTCGTGCACATTACATAGTTTGCAGGAGCTTGTATCTGCAACCTCCAACTTCGCACCAGAGAATTTGGTTGGCAAAGGTGGTTGTAGTTATGTTTACAGAGGGTGTCTTCCAGATGGCAAGGAATTGGCGGTGAAAATTCTGAAGCCATCTGAAAACGTGATAAAGGAGTTTGTTCAGGAAATTGAGATCATTACAACTTTGCGCCACAAGAACATAATATCTATATCTGGCTTTTGCTTAGAGGGCAACCATTTGCTACTAGTTTACGATTTTTTGTCAAGGGGAAGCTTAGAAGAAAACCTTCATGGCAACAAGGCGGACTGTAGTGCATTTGGTTGGCAAGAAAGGTACAAGGTGGCTGTGGGTGTAGCTGAGGCACTGGATTATCTGCATAATGGCTGTGCTAAGGCTGTTATCCACAGGGATGTGAAATCTTCTAATATCCTTCTTTCAGATGGTTTTGAGCCTAAGCTTTCAGATTTTGGACTAGCTAGTTGGGGTTCATCTTCTTCCCATGTTACTTGTACCGATGTAGCTGGAACTTTTGGATACCTCGCACCTGAGTATTTTATGCACGGTAGAGTGACTGATAAAATTGATGTATATGCTTTTGGTGTTGTACTCCTTGAGCTTCTATCAAATAGGAAGCCCATTAACAATGAATGTCCAAAGGGACAGGAGAGCCTTGTTATGTGGGCAACACCAATACTGAAAGGTGGGAAGGTTCCCCAGTTGCTTGATCCAAACCTAGGCATTGGATACGATGATTGCCAGATGAAGAGAATGGTTTTGGCCGCTAGTCTCTGCATTAGACGGGTACCCAGACTGCGGCCTCAAATCAGCCTTATATTGAAACTTCTGCGTGGTGATGAAGAGGTGACAAGATGGGCAGAACAAGAAGCTAATGCACCACAGGAACTTGATGGTTTTGACGAGGAACCAGTTCCAACTAACATACAGTCCCACCTGAACCTTGCTTTGATGGACCTGGAGGATGATACGGTTTCTATCAGTAGCACTGAGCAGAGTGTATCTTTGGAGGACTATTTGCAGGGAAGATGGAGTCGCTGTTCAAGTTTTGACTGA 2418 0.4537 MESEFYCEEGINLCSENAKLSLSRVDSAVQCTVPACVLPHTISTLTIQHSPRHQVRHHGPRARFVLSRHSQDKATNTQERERKGKGREKDRERERKREENKNKKATLPMKLIGDGADGRKVLVGVKLDPSSRELLTWALVKVAESGDLVIALHVLDSITEGTASLLSLVKTFDSVLAVYEGFCNLKQVGLRLKVCRGDSVRKVLVQEAKTFGVSTVILGTSKSHHTIRSSAWVAKYCAKKLPKCISVFSVDNGKIAFRREANGNCGDREKSPEGSSLSPKSLVVYTNKNMKSCGSCALQEISGTVFERGLCDDVEKGDSLALVPFKKLDDGPCFSVVVDNSKHKPGWSLLRNVFHHKRHSSKSSTKNTYIFQRALRQPNYHSSAVVHPDHKHISIEQIEDSPLDGVSGAIVPYGSATIVTLPSICYKSGNIPEELLILQEKYSSSCTLHSLQELVSATSNFAPENLVGKGGCSYVYRGCLPDGKELAVKILKPSENVIKEFVQEIEIITTLRHKNIISISGFCLEGNHLLLVYDFLSRGSLEENLHGNKADCSAFGWQERYKVAVGVAEALDYLHNGCAKAVIHRDVKSSNILLSDGFEPKLSDFGLASWGSSSSHVTCTDVAGTFGYLAPEYFMHGRVTDKIDVYAFGVVLLELLSNRKPINNECPKGQESLVMWATPILKGGKVPQLLDPNLGIGYDDCQMKRMVLAASLCIRRVPRLRPQISLILKLLRGDEEVTRWAEQEANAPQELDGFDEEPVPTNIQSHLNLALMDLEDDTVSISSTEQSVSLEDYLQGRWSRCSSFD 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01775 805 Pfam Protein kinase domain 464 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01775 805 Pfam Universal stress protein family 119 242 IPR006016 -
Phco7g01775 805 CDD USP_Like 120 245 - -
Phco7g01775 805 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 430 535 - -
Phco7g01775 805 PANTHER OS08G0249100 PROTEIN 228 757 IPR046958 -
Phco7g01775 805 Gene3D Transferase(Phosphotransferase) domain 1 536 748 - -
Phco7g01775 805 MobiDBLite consensus disorder prediction 65 105 - -
Phco7g01775 805 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 118 251 - -
Phco7g01775 805 FunFam Putative receptor-like serine/threonine-protein kinase 536 747 - -
Phco7g01775 805 SUPERFAMILY Protein kinase-like (PK-like) 442 731 IPR011009 -
Phco7g01775 805 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 119 223 - -
Phco7g01775 805 Gene3D Phosphorylase Kinase; domain 1 430 535 - -
Phco7g01775 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Phco7g01775 805 Gene3D HUPs 94 245 IPR014729 -
Phco7g01775 805 SMART serkin_6 461 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01775 805 MobiDBLite consensus disorder prediction 48 105 - -
Phco7g01775 805 ProSiteProfiles Protein kinase domain profile. 461 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01775 Phco-Chr7 18124325 18127819 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Phco7g01775 Pkinase 7.3e-42 CL0016