Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01767 ATGTCTCTCGCGCCCTGGCGATGCCCGCATGCCTCGCGCCCTGGCGACGTCCGCATGTCTCTCGCGCCCTGGCAGCGTCCGCATGTCTCTCGCGCCCCGGCGATGCCCGCATGCCTCGCGCCCTCGCGATTTTGGGCGCCAAAAGCTAATTTAGAAGCAGAAAAGAAGATTCGAGAAATGTCTGGGAAGGCGAAGAGGAGAGACGAAGACGGTGCTTCCGATGCCGACTCTGAAGGCCACGCGCCGCCCAAAAAGACATTCAAGAGAAATTCCGACGACGAATCCGACTCTATTGTCGTTTGCGAGATTTCCAAGAACAGGAGGGTTTCTGTGAGGAACTGGCAAGGCAGGATTGTAGTTGACATTCGTGAGTTTTACCTCAAGGATGGCAAGAAACTGCCTGGCAAGAAAGGTATCTCATTGACCATGGATCAGTGGAATGTGCTGCGCACTCATGTTGAAGAAATTGACAAAGCAGTTAGTGAGAATTCTTAG 495 0.5374 MSLAPWRCPHASRPGDVRMSLAPWQRPHVSRAPAMPACLAPSRFWAPKANLEAEKKIREMSGKAKRRDEDGASDADSEGHAPPKKTFKRNSDDESDSIVVCEISKNRRVSVRNWQGRIVVDIREFYLKDGKKLPGKKGISLTMDQWNVLRTHVEEIDKAVSENS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01767 164 FunFam Putative transcriptional co-activator 91 164 - -
Phco7g01767 164 Gene3D Transcriptional Coactivator Pc4; Chain A 89 164 IPR009044 GO:0003677|GO:0006355
Phco7g01767 164 Pfam Transcriptional Coactivator p15 (PC4) 101 151 IPR003173 GO:0003677|GO:0006355
Phco7g01767 164 SUPERFAMILY ssDNA-binding transcriptional regulator domain 100 161 IPR009044 GO:0003677|GO:0006355
Phco7g01767 164 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 66 163 IPR045125 GO:0003713|GO:0060261
Phco7g01767 164 MobiDBLite consensus disorder prediction 55 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01767 Phco-Chr7 17992571 17999977 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Phco7g01767 PC4 1.8e-24 CL0609