Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco7g01752 | ATGGCGAGCACCAAAGTTCAGAGGGTTATGACTCAGCCCATTAACTTGATTTTCAGGTTTCTTCAGAGCAAAGCACGCATTCAGATTTGGCTTTTTGAGCAAAAGGATTTGAAGATTGAAGGCCGAATCATTGGTTTTGATGAATACATGAATTTGGTTCTTGAGGATGCTGAAGAAGTGAACATCAAAAAGAAAAGCAGAAAGACCTTAGGGAGGATCCTTCTTAAAGGAGACAACATAACCTTGATGATGAGCACGTTTCAGAAAAGGCAAATGCCTATTATGCAGGTTGTGAAATAG | 300 | 0.3967 | MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLKIEGRIIGFDEYMNLVLEDAEEVNIKKKSRKTLGRILLKGDNITLMMSTFQKRQMPIMQVVK | 99 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco7g01752 | 99 | SUPERFAMILY | Sm-like ribonucleoproteins | 12 | 84 | IPR010920 | - | |
| Phco7g01752 | 99 | PANTHER | SMALL NUCLEAR RIBONUCLEOPROTEIN E | 2 | 86 | IPR027078 | GO:0000398|GO:0005681 | |
| Phco7g01752 | 99 | SMART | Sm3 | 19 | 85 | IPR001163 | - | |
| Phco7g01752 | 99 | ProSiteProfiles | Sm domain profile. | 16 | 89 | IPR047575 | GO:0003723 | |
| Phco7g01752 | 99 | CDD | Sm_E | 7 | 85 | IPR027078 | GO:0000398|GO:0005681 | |
| Phco7g01752 | 99 | Gene3D | - | 1 | 86 | - | - | |
| Phco7g01752 | 99 | FunFam | Small nuclear ribonucleoprotein E | 1 | 87 | - | - | |
| Phco7g01752 | 99 | Pfam | LSM domain | 20 | 83 | IPR001163 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco7g01752 | Phco-Chr7 | 17696258 | 17697954 | Dispersed |