Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01748 ATGTCATCGGGTTCCAGCTTAAAGATCCACAAGATGTTGACACGCGGCACACCAGCATTGGGTAGAGGAAGGAACACGTCACTTTCTCACAGTGAACTGAACGCAATAATAGCTAACAACATTTACCAACAACAACTACAACAGGAAGCAAATAGAGTTGGAAATCAGAAGATTTTAGAGTTAAGGGGAAGAAGACAGAAGCGAGAAGAGGAAAAGAGAATGAAGGGTGAATTAGAGTTGCCACCTGGGTTCAGGTTTCACCCCACGGATGATGAATTGGTGAACCACTATCTGTGTAGGAAGTGCGCTGGTCAACCGATTGCTGTTCCTATTATTAAAGAGATCGATTTGTACAAGTTTGATCCATGGCAGCTTCCAGAAATGGGATTTTACGGCGAGAAAGAATGGTACTTCTTTTCTCCTCGGGACCGCAAATACCCCAACGGCTCACGGCCGAATCGCGCCGCCGGAAGTGGGTATTGGAAGGCCACCGGCGCCGATAAACCGATCGGAAAGCCGAAGGCGCTTGGGATAAAGAAAGCTTTGGTTTTTTACTCAGGAAAAGCCCCGAAAGGAGAGAAAACCAATTGGATCATGCACGAATATCGCCTCGCCAATGTTGACCGATCAGCCTCCAAGAAAAACAACAACCTAAGGCTTGACGATTGGGTGTTGTGTCGAATTTACAACAAGAAAGGGAAGATTGAGAAATACAACACGGGGGCACCGAAAATGGAGGCTGGGGTGGTTCATAATTTGGATCATGAGATGAAGCCGGAGATTGAGAAGCTTAGGAATGAGCAATGGTTTATGGAGAGTTCAGAGTCGATGCATAGGGGGCAGACTGAGTCGAGCGGTTCAGAGCAGGTGGTTTCGGCGGACGTGAGGTGGGAGAGGGAGGTGCAGAGCCACCCCAAATGGAATGACATTGGGCTACAGCTAGAAAACGCCTTTGATTTCGAATACAATTACTTTGACAATAATAACCTTTCGGTGGATGACCCTTTTGGGAATGTTGAGTACCAAATAGGCCACGTGTCTCCCTTGCAGGACATTCTGATGGAAGCCCTGTTGATGTGA 1080 0.4731 MSSGSSLKIHKMLTRGTPALGRGRNTSLSHSELNAIIANNIYQQQLQQEANRVGNQKILELRGRRQKREEEKRMKGELELPPGFRFHPTDDELVNHYLCRKCAGQPIAVPIIKEIDLYKFDPWQLPEMGFYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYSGKAPKGEKTNWIMHEYRLANVDRSASKKNNNLRLDDWVLCRIYNKKGKIEKYNTGAPKMEAGVVHNLDHEMKPEIEKLRNEQWFMESSESMHRGQTESSGSEQVVSADVRWEREVQSHPKWNDIGLQLENAFDFEYNYFDNNNLSVDDPFGNVEYQIGHVSPLQDILMEALLM 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01748 359 Gene3D NAC domain 89 236 IPR036093 GO:0003677|GO:0006355
Phco7g01748 359 ProSiteProfiles NAC domain profile. 80 231 IPR003441 GO:0003677|GO:0006355
Phco7g01748 359 SUPERFAMILY NAC domain 74 231 IPR036093 GO:0003677|GO:0006355
Phco7g01748 359 Pfam No apical meristem (NAM) protein 81 204 IPR003441 GO:0003677|GO:0006355
Phco7g01748 359 PANTHER NAC TRANSCRIPTION FACTOR 56 80 272 - -
Phco7g01748 359 MobiDBLite consensus disorder prediction 1 25 - -
Phco7g01748 359 FunFam NAC transcription factor 89 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01748 Phco-Chr7 17654144 17655680 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco7g01748 NAM 8.3e-39 No_clan