Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01726 ATGAAGATCAAATCCCATTCTTCCTTCTTCCTCGTGTTTCTTGTAGCCATTACTCACACACATGTTTGTTTAGCTGAATGTGATAACGTGAAAGACTATTGCCCTACAAGTACTCAACCACAAAAACAAGCCATATTCATCAATGGCCTCTCCTGTGAGAACCCAGATAACACAAGTGCCCATGATTTCAAGAGCAAAGAACTAAGCAAATCTGGTTCTAGGGACGATTTTGGTTCGTTAGTTAAAATTGTTACTGCTTCCAAGTTTGTGGGGCTCAACACTCTTGGCCTTGCAATTGGTAGAAGTGACATTGAAGTGGATGGGCTTGTGAACCTCCACAATCACCCAAGAGCCACTGAGATGATCTATGTGAACCAAGGTAGGTTGCTGGCTGCGTTTCTCAACACCCAAAACCAGCTCTTCCAAAAGACTCTCAATGCTGGTGACGTCTTTGTCATCCCCAAGGGCTTGTTCCATTTCTTCCTCAACCGTGGTGAACAAGTTGCAACTTTGTTCTCAGTTTTCAACAGCCAAAATCCAGGGCTAGGATCACTCTCCTCCCTACCCTCTGAATCTGAGAACACACTGGAATCAGTTCAGAAGATAAAGATAAAACTCAATTCACTCTCTGATTCACAACTTCATTGTGATGGTGATTTGACTTCGGCAGTGCTGGATATCATTTATGACCATTAG 696 0.431 MKIKSHSSFFLVFLVAITHTHVCLAECDNVKDYCPTSTQPQKQAIFINGLSCENPDNTSAHDFKSKELSKSGSRDDFGSLVKIVTASKFVGLNTLGLAIGRSDIEVDGLVNLHNHPRATEMIYVNQGRLLAAFLNTQNQLFQKTLNAGDVFVIPKGLFHFFLNRGEQVATLFSVFNSQNPGLGSLSSLPSESENTLESVQKIKIKLNSLSDSQLHCDGDLTSAVLDIIYDH 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01726 231 Gene3D Jelly Rolls 25 209 IPR014710 -
Phco7g01726 231 ProSitePatterns Germin family signature. 108 121 IPR019780 GO:0030145
Phco7g01726 231 SMART Cupin_1_3 66 208 IPR006045 -
Phco7g01726 231 Pfam Cupin 78 187 IPR006045 -
Phco7g01726 231 SUPERFAMILY RmlC-like cupins 74 187 IPR011051 -
Phco7g01726 231 PRINTS Germin signature 143 163 IPR001929 GO:0030145
Phco7g01726 231 PRINTS Germin signature 176 191 IPR001929 GO:0030145
Phco7g01726 231 PRINTS Germin signature 113 133 IPR001929 GO:0030145
Phco7g01726 231 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 24 190 - -
Phco7g01726 231 CDD cupin_OxOx 28 179 IPR001929 GO:0030145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01726 Phco-Chr7 17332743 17333438 Transposed