Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01725 ATGGAAAGAGCTAGCAGCCGCAACAGTGGTGAGAGTAAAAAGGGCTGCAGTAGAGGACATTGGAGACCCTCCGAAGATGAGACACTTAAGAAACTTGTGAAGCAATATGGTCCCCAAAACTGGAACTTTATTTCAGAACATCTAGAACGAAGATCAGGGAAAAGTTGTAGATTGAGATGGTACAATCAGCTAGACCCAAACATCATCAAAAAGCCATTCACCGAAGAGGATGAAGAAAGACTCCTAGCATTGCATAAAGTGAAGGGAAACAAATGGGCTGCAATAGCCAGATTCTTCCCTGGAAAAACTGACAATGCTGTCAAGAATCAGTTCCATGTATTAATGGCCAGAAGGAAGAGGGAGCGTTTGGCACTGTTTGGTGACACATTTGGTCATAATCCTCTAATTAATCTTAACATGCAAAACTACAAAAACAAGGGAATGTTTGGCACGTATGCCTCACAGAAACCAACTCCTTGGACTTCATTCAGTGCATCTTCAACCATCACATCTTGTTTTAATATTTCTAGTGTGGCTCACAGAGACTCAAACGTGTCTTCAAGTGCTAGAGAGAAAGCATTGTTTGATTTGGACCATTTTTCTTGTCGTAGTCCTCCAACTGTTGGTTCTTCTATTCTTGGCAGTTACTACAGTTTCACTGCCCCAGGACTTCCTAGTGTTGGCAAGGTTGTTCCCCTTCCACACAAATTTTCAAACTATAGTTATGACCACAGACCTATGGACTCTAACAAAAGTTGCAAAAAAATTAAACATGCACGTGATAGCTCCTCCACATTATGCAAGTTGAGTACCACTCTTGAGCCTCTTAATCTCAAGCAAAAGGGTGTTTCCTTCATAGACTTTCTCGGAGTGGGAAGTTCTCCTAATCATCGTCACAATTCACACCATGACGTGCTTTAA 921 0.4169 MERASSRNSGESKKGCSRGHWRPSEDETLKKLVKQYGPQNWNFISEHLERRSGKSCRLRWYNQLDPNIIKKPFTEEDEERLLALHKVKGNKWAAIARFFPGKTDNAVKNQFHVLMARRKRERLALFGDTFGHNPLINLNMQNYKNKGMFGTYASQKPTPWTSFSASSTITSCFNISSVAHRDSNVSSSAREKALFDLDHFSCRSPPTVGSSILGSYYSFTAPGLPSVGKVVPLPHKFSNYSYDHRPMDSNKSCKKIKHARDSSSTLCKLSTTLEPLNLKQKGVSFIDFLGVGSSPNHRHNSHHDVL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01725 306 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Phco7g01725 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 68 IPR017930 -
Phco7g01725 306 SMART sant 17 66 IPR001005 -
Phco7g01725 306 SMART sant 69 117 IPR001005 -
Phco7g01725 306 Gene3D - 71 133 - -
Phco7g01725 306 CDD SANT 72 115 IPR001005 -
Phco7g01725 306 CDD SANT 21 62 IPR001005 -
Phco7g01725 306 ProSiteProfiles Myb-like domain profile. 13 64 IPR001005 -
Phco7g01725 306 PANTHER MYB PROTEIN-RELATED 18 196 - -
Phco7g01725 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 119 IPR017930 -
Phco7g01725 306 Pfam Myb-like DNA-binding domain 21 81 - -
Phco7g01725 306 MobiDBLite consensus disorder prediction 1 23 - -
Phco7g01725 306 Gene3D - 18 69 - -
Phco7g01725 306 FunFam MYB transcription factor 18 69 - -
Phco7g01725 306 SUPERFAMILY Homeodomain-like 17 111 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01725 Phco-Chr7 17331408 17332464 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phco7g01725 Myb_DNA-bind_6 5e-16 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01725 7 17331408 17332464 Phco7g01725 7 17331408 17332464 ECH
Phco7g01725 7 17331408 17332464 Phco2g00747 2 7989489 7991331 PCT