Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01714 ATGGCCCGAAGAAAATCCACTCCAGGGTTTCGGTTCCGGCCCACTGACGTTGAGTTGATTGAGTTTTTTCTGAAGAGGAAGGTTCGGGGTAAGGAAATTCCTAGCGGAGTAATCGCTGAGCTTGACTTGTACAAATATGCTCCGTGGGATCTTCCAGATAAATCTGCGCTCCAGAGTGGGGATTTGGAGTGGTACTTCTTTTGCCCGAAGGGGAAGAAATATTCGACTGGAGGGAGGTTTAATCGGTCGACGGAGGCTGGGTACTGGAAGACTACTGGGAAGGATAGAGCGGTTGAACACAAGAATCGAGTTGTGGGGATGATTAAAACTCTGGTTTTTCACACCGGTAAAGCCCCTAAGGGAGATCGGACTGATTGGGTTATGCATGAATTCAGAGTTGATGACAAGGAGATGGTTGACGAAGGCAGTTCACAGGACTCCTATGTAATTTGTAGGATATTCCGAAAGGAAGGTCCTGGTCCTAGGAATGGCGCACAATATGGTAAACCATATGATGAGAAAGAATGGGATACAGATGAGGAAATTGACTCTGTGCAATCTGAACGTATTGCTTCTGTGTCGACACCTGTTCTTGTACAACCCAGTGAAAGTCATATTTCTATTGCAAATGACATCAATCCCTCTACAAGTGGATGTGCTGGATTGACCTCTGTATCATGTGCATCAAAATTGATGCCTTCCTGCTCAGCATATCGTGTGGCTTCTAACAATCAAATTGACTCTGTATCATGTGTATCAGAATTGATGCCCTCTTGCTCAGCACTACCTTTTTCTCCAAACTCTGCATTTGATTCTGTATCAGGTCTATCAAAAGTGGCACCCTCTTGTTCAGCAGTTCCTTTAACTCCAAACTATGATGTTGAATCTGTATCATGTGTATCAAAATTGATGCCCTCTTGCTCAGCATTTTCTTCTGCTCCAAACAGTGAAGTTGACTCTGTATCTGTATCAGAAATGCCTTCTTGCTTGCCAGTTGCTTCAGCTCCAAACAATCTAGTTGACACTTTATCATCTGTATCAGAATTGATGCCCTCTTGCACGGCACCATCTCCAAACCATCAAGATGATGAGAACATTTTATCTTTGCTAGGTTATTTCAAAGAAGATGATGACACAATGGCTGTGAACGAAAACAATGGAATTAAGAAGGTTGATCCTGATCAGGCGAACAATGCTGAATGCGCTCCTTGTTTGGATCCAAATGTGATTTTTGAGAACCTAGGAGACCTTGACAGCTTGGTTGGATTGGGTGAAGGCAGTTTTTCCTGTGGCCAGAAAAATGGACTTTCTACAAGCGATATGTTTTATACAGGTGGTGATTATATGTTTGGGTCTTGGGAACCCCAAGACTTTTTGGAGTTGACGGACCTAGCCGGGCCACAGCCCTGGCAGAATAAGCATGGAAGTTCTGGCGAATATAAGTAA 1446 0.4385 MARRKSTPGFRFRPTDVELIEFFLKRKVRGKEIPSGVIAELDLYKYAPWDLPDKSALQSGDLEWYFFCPKGKKYSTGGRFNRSTEAGYWKTTGKDRAVEHKNRVVGMIKTLVFHTGKAPKGDRTDWVMHEFRVDDKEMVDEGSSQDSYVICRIFRKEGPGPRNGAQYGKPYDEKEWDTDEEIDSVQSERIASVSTPVLVQPSESHISIANDINPSTSGCAGLTSVSCASKLMPSCSAYRVASNNQIDSVSCVSELMPSCSALPFSPNSAFDSVSGLSKVAPSCSAVPLTPNYDVESVSCVSKLMPSCSAFSSAPNSEVDSVSVSEMPSCLPVASAPNNLVDTLSSVSELMPSCTAPSPNHQDDENILSLLGYFKEDDDTMAVNENNGIKKVDPDQANNAECAPCLDPNVIFENLGDLDSLVGLGEGSFSCGQKNGLSTSDMFYTGGDYMFGSWEPQDFLELTDLAGPQPWQNKHGSSGEYK 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01714 481 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Phco7g01714 481 SUPERFAMILY NAC domain 6 156 IPR036093 GO:0003677|GO:0006355
Phco7g01714 481 FunFam Nac domain-containing protein 86 15 159 - -
Phco7g01714 481 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Phco7g01714 481 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 240 - -
Phco7g01714 481 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01714 Phco-Chr7 17210279 17214338 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco7g01714 NAM 5.1e-34 No_clan