Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01693 ATGCATTTGGGTTTCATTCTCGCTTCCCCCTCTATTTCTCTGCATTTGGGTTCCATTCTCTCTCTGATGTCCTTTTCTCTCTCTAAATTCTATGGAATTCCTCCGGAGAGGCTAAGCTTAGAAGCTCCTGTTGTTCTAAGGTACATGATGACTTTGGTAGAAACAGAAAGCTCAGAGGAGGGTGCAGGCCTTCTAGAGCCTCCTGATCCCAATATTGTTGAAACTGATCCTACTAATCGCTACATTAGGTATAAAGACGTTATCGGTCAAGGAGCTTTCAAGACTGTTTACAAGGCATTTGATGAAATTAATGGACTTGAAGTTGCATGGAGCCAAATTCATATTGATGAGGTATTACAGTCACCTGGTGGCCCAGATAGGTTGTACTCAGAAGTGCATCTCTTGAAGTCACTAAAGCACGAGAACATTTTGACTTTCCATAATTCTTGGATTGATGACAAGCACGGGACTATGAACTTGATTACTGAGTTATTCACCTCTGGGAACATCAGACAGTACATCAAGAAACACAGGAAGGTTGACATGAAGGCGGTTAAAGGATGGGCAAGGCAAATTTTAAATGGTTTGAACTATCTTCACAGTCACAACCCACCTATTATGCATAGGGACATGAAGTGCGATAATATATTTATAAATGGTCACCGAGGAGAAGTTAAAATTGGAGATCTAGGGTTGGCAACTCTATTAAAACAAACTAATGCCAAGAGTGTAATTGGAACCCCGGAGTTCATGGCACCTGAACTGTATGATGAACATTATAATGAATTAGTCGACATATATTCTTTTGGGATGTGCATGCTTGAGTTGGTTACGTCTGCATATCCTTACAGTGAATGTAGAAACTCAGCTCAGATATACAAGAAAGTTTCATCTGGCATAAAGCCTGTTGCTCTTTCCAAACTCAAAAATGCAGAAGTAAAATCATTTATTGAGAAATGTCTTGTCCCAGCGTCTCAAAGATTGTCAGCGAAAGAGCTTTTGATGGACCATTTTCTGCAAGTGAGTGGTTCATTGAAGAATCGTCGTCTACCATTACCAGATATCGTTCTTCCTAAGTATGGAGCCTTTGAAAATCGTTGTCTTATGTCAGAAGGCCCTGCTAGTACGCGTATTAGATCCATTTCAATGGATCTTGGTGATGCCACTGAGCTACCATTAACCACTTTACTCTATAATTCTGTTGATTCTGTTGATGATGTTTTGCCTTTACCATGTGTTGAGATAAGAAGGTTAAAGGAAGGTGACATATTTTTTCTAAAAGGTGAACAAAATGATCAAAAGTCTGTGTCACTAGTTCTCCGCATAGCTGATCAAAGTGGGCGGGCAAGAAATATCCATTTCATATTCTACATCAACAGTGATACTGCCATTTCAGTTTCAAGAGAAATGGTTGAGCAACTTGAACTGGCTGAACAGAATGTTAAATTCATAGCAGAGTTGATCGATCTATTATTGACCACTTTGCTTCCTGATTGGAAACCTTGTGTAGCAATTGATCATTTAGTTTCTTCTAATGGTAAATTATCTCATTCAAGTCAACAAAAAGACTTTGAGTTAACAAAACACACACAAAGCTCAAGAGATTCTATCCAAATTGTGGCTAAAGATGCTGGTGTCGCAACCTCACGTAGAACATCAACAGATAGGGAGAACAAAGATAATGTCATTTCTGACAAGGTTTTAACTAATACAAGCATTATCATTCAAGGAGAGGCAAAGATAGACGACTCTTGTTCTGAGACGTCACAGACTTGTGCAACATTTGACTTCAATGATAAGCATTTTTCTACAGTTTCTTTCATGTCTGCTAAATCAGGATTTACAGACTTTGACTTGCACAGAGTTAATAGTCAAAGCTCACTTGCATCTGAATTCGAGGCTTCGTCTGAATATAGGAGTTTCCCACGTGTGGCAAGCTATGGTACCATGAAATTATTAAATTGCCGTAGTAGTTCTCCCTCTTTGTATGAACCTGAGGATGAGTTGAGAACAGAGTTAGAGATGATTGAACAACAATATCAAGAAGCAATTAAAGATTTATCAAAAAGAAGATATCAGGCCATCTCTGAGGCTAGGAGGAAGTTGTCACAGAAATTGGCAAACTTAAAATAA 2133 0.3882 MHLGFILASPSISLHLGSILSLMSFSLSKFYGIPPERLSLEAPVVLRYMMTLVETESSEEGAGLLEPPDPNIVETDPTNRYIRYKDVIGQGAFKTVYKAFDEINGLEVAWSQIHIDEVLQSPGGPDRLYSEVHLLKSLKHENILTFHNSWIDDKHGTMNLITELFTSGNIRQYIKKHRKVDMKAVKGWARQILNGLNYLHSHNPPIMHRDMKCDNIFINGHRGEVKIGDLGLATLLKQTNAKSVIGTPEFMAPELYDEHYNELVDIYSFGMCMLELVTSAYPYSECRNSAQIYKKVSSGIKPVALSKLKNAEVKSFIEKCLVPASQRLSAKELLMDHFLQVSGSLKNRRLPLPDIVLPKYGAFENRCLMSEGPASTRIRSISMDLGDATELPLTTLLYNSVDSVDDVLPLPCVEIRRLKEGDIFFLKGEQNDQKSVSLVLRIADQSGRARNIHFIFYINSDTAISVSREMVEQLELAEQNVKFIAELIDLLLTTLLPDWKPCVAIDHLVSSNGKLSHSSQQKDFELTKHTQSSRDSIQIVAKDAGVATSRRTSTDRENKDNVISDKVLTNTSIIIQGEAKIDDSCSETSQTCATFDFNDKHFSTVSFMSAKSGFTDFDLHRVNSQSSLASEFEASSEYRSFPRVASYGTMKLLNCRSSSPSLYEPEDELRTELEMIEQQYQEAIKDLSKRRYQAISEARRKLSQKLANLK 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01693 710 Coils Coil 666 690 - -
Phco7g01693 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Phco7g01693 710 CDD STKc_WNK 80 339 - -
Phco7g01693 710 Gene3D - 434 531 - -
Phco7g01693 710 FunFam Serine/threonine-protein kinase WNK8 434 532 - -
Phco7g01693 710 Gene3D Transferase(Phosphotransferase) domain 1 165 345 - -
Phco7g01693 710 Coils Coil 692 710 - -
Phco7g01693 710 SUPERFAMILY Protein kinase-like (PK-like) 83 340 IPR011009 -
Phco7g01693 710 FunFam Probable serine/threonine-protein kinase WNK1 67 163 - -
Phco7g01693 710 SMART serkin_6 82 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01693 710 FunFam probable serine/threonine-protein kinase WNK9 165 344 - -
Phco7g01693 710 ProSiteProfiles Protein kinase domain profile. 82 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01693 710 Gene3D Phosphorylase Kinase; domain 1 68 163 - -
Phco7g01693 710 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 69 697 - -
Phco7g01693 710 Pfam Protein kinase domain 85 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01693 Phco-Chr7 16784636 16787830 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Phco7g01693 Pkinase 3e-51 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01693 7 16784636 16787830 Phco7g01693 7 16784636 16787830 ECH