Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01687 ATGCTCACCCTTTTTAAACTCGTAAATAACAACAATGCTGTAGTAGCCCTTCAAATTTCAAATACATCAAAACAAACACTCAACACAACTCCAGTTATTACAGTACCTTCATTTTTTTTCCCCAACAAGCTTTCACCGAGGTTGTTTTTTTTTTTTTCTCTTGCCCCCAACCTCTACTGTTTCCCACTTGTAACTTCTATCAAACCGATGCTGCAAATCTCTACTTCACCGGAAACCCCTCTTGCGAATCCTGAGGGAGGCGCCGCGCCCGTCTCCGAGGGGCTGAAAGCGGAGCACGGCGAAGACGGTGACCGGAATTCCGCCGCGTGCCGGTGGCCCAAAGAGGAGACAATGGCTTTGCTCAAGATAAGGTCTGACATGGACGTTGCTTTCAGAGATACAAACCCCAAAGCCCCTCTCTGGGAACAAGTCTCAAGGAAATTAGCGGAGCTGGGATATAACAGGAGTGCGAAGAAGTGCAAGGAGAAATTCGAGAACATTTACAAGTACCATAGGAGAATCAAGGAAGGTCGTAGTGGCAAATCCAACGGTAGCAAGACTTATAGATTTTTCGAGCAATTAGAAGCTTTAGAAGGACACCACTCACTTCTCCCTCCTTCTATAAGCGACCCAGAAACAACTACGACAACAACAACAACCCACGTGCCCGACAACAAAATCAACCCCAGCAACAACTTTGATGTTATTTTAGATGCGGTTCCGTGTTCCGTAAGTGCTTACGCGGGGGAGCATTCTAGTTCGACGACTTCGTGTTCGGGGAAGGGGTTTAGGAAGAAGAAGCTGACGCGGTTTCTGGAGGGATTGATGAGGGAAGTGATAGAGAAGCAAGAGACGCTGCAGAGGAAGTTCATGGAGGTGTTGGAGAAGTGCGAGAAGGATCGAGTGGCGAGGGAGGAGGCGTGGAAGAAGGAGGAGCTGGCCCTGATTAAGACAGAGCGGGAGCTTCTGGCTCAGGAACGCTCCATCGCCGCGGCTAAAGATGAAGTCGTCCTTGCTTTTCTAAGAAAGTTCGCACAAGCTGAAGGCACGGTGCAGTTGCTGGAGAAAATTCAGGTTCAAAATGACAAGCACAGGGACATGCAACAAAGTGGGAATGTTCATGTTACTGCTAATGGAGGTGGTGATGTGAGTGATATGGATAAGCGAGAGTGTGAGAATAATTTGAGTGTTAGGAATTTCGTGCATATGAGTAGTTCGCGGTGGCCGAAGGATGAAGTGGAGGCTTTGATAAGGCTGAGGACTCAACTTGATGTGCAGTCCCAAGGGAACAATAATAGTAGTAACGGCGTGTCAAAGGGGCCTCTTTGGGAGGAAATATCTTTGGCCATGAAGGGCCTTGGCTACGATCGCAGTGCGAAGAGGTGCAAAGAGAAATGGGAGAACATAAACAAGTATTTCAAGAGGATGAAGGAGAAGAACAAGAGGAAGCCTGAGGATTCCAAAACCTGTCCCTATTATCACCATCTGGAGGTTCTGTACAGCAAGAAGCCTAAGAGGGTGAATGTAAATGATTTTGGGAACGAGTTGAAGCCCGAGGAGCTCTTGATGCATATCATGGAGAGTCAAAGTCAAGAAGAGAGACAAGCGCAGGAACACCAGCTACAGAGTCAGTCATCATCTGAACATGGCGAGAAAGAGAATAGGGATAAACATGAGGGAGATGATGAAGATCAAAATGGGTTTCAGAATTTGATGGTTGAAGATAGTCCTTCCATAACAATTATGAGTTAA 1752 0.4692 MLTLFKLVNNNNAVVALQISNTSKQTLNTTPVITVPSFFFPNKLSPRLFFFFSLAPNLYCFPLVTSIKPMLQISTSPETPLANPEGGAAPVSEGLKAEHGEDGDRNSAACRWPKEETMALLKIRSDMDVAFRDTNPKAPLWEQVSRKLAELGYNRSAKKCKEKFENIYKYHRRIKEGRSGKSNGSKTYRFFEQLEALEGHHSLLPPSISDPETTTTTTTTHVPDNKINPSNNFDVILDAVPCSVSAYAGEHSSSTTSCSGKGFRKKKLTRFLEGLMREVIEKQETLQRKFMEVLEKCEKDRVAREEAWKKEELALIKTERELLAQERSIAAAKDEVVLAFLRKFAQAEGTVQLLEKIQVQNDKHRDMQQSGNVHVTANGGGDVSDMDKRECENNLSVRNFVHMSSSRWPKDEVEALIRLRTQLDVQSQGNNNSSNGVSKGPLWEEISLAMKGLGYDRSAKRCKEKWENINKYFKRMKEKNKRKPEDSKTCPYYHHLEVLYSKKPKRVNVNDFGNELKPEELLMHIMESQSQEERQAQEHQLQSQSSSEHGEKENRDKHEGDDEDQNGFQNLMVEDSPSITIMS 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01687 583 CDD GT1 111 175 - -
Phco7g01687 583 PANTHER FI21293P1 89 558 - -
Phco7g01687 583 MobiDBLite consensus disorder prediction 77 108 - -
Phco7g01687 583 MobiDBLite consensus disorder prediction 529 583 - -
Phco7g01687 583 Pfam Myb/SANT-like DNA-binding domain 406 497 IPR044822 -
Phco7g01687 583 Pfam Myb/SANT-like DNA-binding domain 110 197 IPR044822 -
Phco7g01687 583 MobiDBLite consensus disorder prediction 545 565 - -
Phco7g01687 583 Coils Coil 315 335 - -
Phco7g01687 583 MobiDBLite consensus disorder prediction 202 226 - -
Phco7g01687 583 SMART sant 108 170 IPR001005 -
Phco7g01687 583 SMART sant 404 472 IPR001005 -
Phco7g01687 583 CDD GT1 406 477 - -
Phco7g01687 583 ProSiteProfiles Myb-like domain profile. 406 470 IPR001005 -
Phco7g01687 583 MobiDBLite consensus disorder prediction 569 583 - -
Phco7g01687 583 FunFam Trihelix transcription factor GT-2 112 173 - -
Phco7g01687 583 MobiDBLite consensus disorder prediction 207 226 - -
Phco7g01687 583 Gene3D - 112 173 - -
Phco7g01687 583 Gene3D - 408 475 - -
Phco7g01687 583 FunFam Trihelix transcription factor GT-2 408 475 - -
Phco7g01687 583 ProSiteProfiles Myb-like domain profile. 111 168 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01687 Phco-Chr7 16699674 16701623 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phco7g01687 Myb_DNA-bind_4 1.5e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01687 7 16699674 16701623 Phco7g01687 7 16699674 16701623 ECH