Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01662 ATGGGATGCGTTTGTGGCAGGTTTTCTCCCCCTCCCCAAGCTGAGAGGCAGAAACAGCCAGTGAAGAGAGTTTTGAGCCGCAAGGGTTCCAGGCCACGCTCCTCTAATGTGGGAGAGAGGGTGAAAAGGGAGACTCAGAGAGTGCGTGTGAGTGTGAATAAGGATTCAGGTGGAGGTGTTGTAGGAGGAGACGGAGGAGGAGAAAATGTTGCTAAAAAAGAGAAGAATAAGTTATGTGAGGATGCTGCTAAAGAAAGTAAGAGTAGTAAAGATTTGGATTTTAAGGAGTCCAAATATGAATCTGAGGAAGGGTGGCCAAAGTGGTTACTGGATAACATCCCCACCAATGTTCTGGCTAAACTTGTTCCCAAGAGCGCTGATTCCTATGAAAAACTTGCCAAGATAGGACGTGGAACATATAGCAATGTGTACAAAGCAAGGGAGAAGGGGACGGGAAAGATTGTTGCTTTGAAGAAGGTACGGTTTGACACATCAGATTCTGAAAGCATAAAGTTTATGGCAAGAGAGATCATGATGCTGCAGAAGCTTGATCATCCCAATGTCATGAAGCTTAAAGGACTAGCTACATCGAGGATGCAGTATAGTCTTTATCTTGTTTTTGACTTCATGCAGTCTGATCTCACACGCATTATTTCTCGACCCGGGGAGACACTCACCGAACCGCAGATTAAGTGCTTTATGCAGCAGCTACTTTGTGGTCTCCAGCACTGTCACGAGAGGGGAATTATGCACCGAGATATTAAGGCTTCTAACTTGTTAATAGACAGAAGGGGGGTGCTGAAAATTGGGGATTTTGGACTTGCAACTTCCATTGAATCTGAAAAACCTCTAACAAATAGAGTGGTAACACTTTGGTATAGAGCTCCAGAACTTCTTTTGGGTTCAATCGATTATGGATATAGCATTGATCTCTGGAGTGCAGGGTGCCTCTTGGCTGAGATGTTTGTTGGAAAACCAATTATGCCTGGCAGGACAGAGGTTGAACAGATTCAGATGATCTTCAAACTTTGTGGTTCTCCTTCAGAGGAATACTTTAAAAAGCTGAAGCTAACAACAAGCTATCGACCTCGACAACATTACAAACCTTCTTACCAAGAGAACTTCCACAAGTTTCCTTCCTCTACCCAGGCACTCTTGGCTACACTTCTTGATCTCAACCCCACTAATCGTGGAAGTGCTGCTTCTGCCCTTAAAACTGAATTCTTCCTATGTAGTCCATTAGCATGTGACCCTTCAGCTTTACCAGTAATCCACAAAGACGAGGATGAACGCTTACAAACTAAGAGAAGCAAAAGGCACAGGGTTTCTAAAAGAGGGCAACCATCTCAAACAAGTAAAAGTGAAGCTGAATCAGGAAAAAACCAAATTGCTGAACAACCCCGTAAAGATACAGAATCATCGAAAGAGAAGAATGTCGGACAACAGAAGCAGGGTCAAGAAACTGGGTATAGTGCTAGCAGCACATCATCTGGTTCAAGACAATTCACGAATGAAGGGAGCACAAATGCATCTTTGTCCCCAGCTTTTCTCTCAAGTGGCAGTGTGAGAAAATCTCCCAAAACAGAGGGTAACCCAAATGCTCTTAAGAACATAAACCACTACAATGCACTTTTACAGGCCTCAATGATTGATATGATCAACCCCAGTGAAGGCAGCGAAGTTCCTCAGCTTCCAAAATCATTCTCTCAGTTGGATTTTCGACTTGGTCCAGACAAGCCATCAAACCTCTATAGCTTATCAAATAAACATATTTAA 1776 0.4341 MGCVCGRFSPPPQAERQKQPVKRVLSRKGSRPRSSNVGERVKRETQRVRVSVNKDSGGGVVGGDGGGENVAKKEKNKLCEDAAKESKSSKDLDFKESKYESEEGWPKWLLDNIPTNVLAKLVPKSADSYEKLAKIGRGTYSNVYKAREKGTGKIVALKKVRFDTSDSESIKFMAREIMMLQKLDHPNVMKLKGLATSRMQYSLYLVFDFMQSDLTRIISRPGETLTEPQIKCFMQQLLCGLQHCHERGIMHRDIKASNLLIDRRGVLKIGDFGLATSIESEKPLTNRVVTLWYRAPELLLGSIDYGYSIDLWSAGCLLAEMFVGKPIMPGRTEVEQIQMIFKLCGSPSEEYFKKLKLTTSYRPRQHYKPSYQENFHKFPSSTQALLATLLDLNPTNRGSAASALKTEFFLCSPLACDPSALPVIHKDEDERLQTKRSKRHRVSKRGQPSQTSKSEAESGKNQIAEQPRKDTESSKEKNVGQQKQGQETGYSASSTSSGSRQFTNEGSTNASLSPAFLSSGSVRKSPKTEGNPNALKNINHYNALLQASMIDMINPSEGSEVPQLPKSFSQLDFRLGPDKPSNLYSLSNKHI 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01662 591 MobiDBLite consensus disorder prediction 478 535 - -
Phco7g01662 591 SUPERFAMILY Protein kinase-like (PK-like) 124 411 IPR011009 -
Phco7g01662 591 Gene3D Transferase(Phosphotransferase) domain 1 212 484 - -
Phco7g01662 591 MobiDBLite consensus disorder prediction 33 50 - -
Phco7g01662 591 ProSitePatterns Protein kinases ATP-binding region signature. 135 158 IPR017441 GO:0005524
Phco7g01662 591 Pfam Protein kinase domain 129 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01662 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Phco7g01662 591 MobiDBLite consensus disorder prediction 447 461 - -
Phco7g01662 591 MobiDBLite consensus disorder prediction 462 477 - -
Phco7g01662 591 MobiDBLite consensus disorder prediction 1 74 - -
Phco7g01662 591 ProSiteProfiles Protein kinase domain profile. 129 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01662 591 Gene3D Phosphorylase Kinase; domain 1 117 211 - -
Phco7g01662 591 FunFam probable serine/threonine-protein kinase At1g54610 116 211 - -
Phco7g01662 591 FunFam Putative serine/threonine-protein kinase 212 447 - -
Phco7g01662 591 PANTHER CELL DIVISION PROTEIN KINASE 127 414 - -
Phco7g01662 591 MobiDBLite consensus disorder prediction 427 535 - -
Phco7g01662 591 SMART serkin_6 129 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01662 Phco-Chr7 16161076 16167076 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Phco7g01662 Pkinase 1.9e-69 CL0016