LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco7g01657	ATGATGTCAACAACGTCTCAAACCAGTCTTAACCATAGCTTGTTTGAAGAGCAAGATCAGATCCCTACGCAGATGGGGTTCAATATTCCTTTTCCATCAAACCAGGCCTTCCCTCCTTTGGGTTGCCATCAATCTTTGAAATCCATCAGTGCAGTAGTTCCTTCACTTTCATCGGAACCTACTTCTTCTGCAGCCAATTTTGCAGAAACCCTATTTTCAACCGCTGTTCAGAGACCACGAGAAGATCTCACTTCAAGTTTGGTAGGAGGAGGAGGACAGCTCCTTTCCTTGAACAGATCGAGAGTGAATCCATGGGCATGGGAAGAAGTGAGCGATTGCTTGATGAGCAAAAGAATGGGAGGAGATGATAATCGTCATCTAGGGGTTTCCGCCATGAAGATGAAGAAAATGAAGGGAAGGAGAAAGGTGCGGGAGCCAAGGTTTTGCTTCAAGACTATGAGCGATGTGGATGTGTTAGATGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAATACTCAGCACCCAAGAAGCTACTACCGTTGCACCCAAGATAACTGTCGAGTGAAGAAACGCGTGGAGCGGTTGGCGGAGGATCCAAGGATGGTGATAACCACATATGAAGGGAGACATGTGCACTCGCCATCAAATGAACTTGAAGACTCACAATCTCCTTCTGAACTTAGTAGCTTCTTCTGGTAG	711	0.4613	MMSTTSQTSLNHSLFEEQDQIPTQMGFNIPFPSNQAFPPLGCHQSLKSISAVVPSLSSEPTSSAANFAETLFSTAVQRPREDLTSSLVGGGGQLLSLNRSRVNPWAWEEVSDCLMSKRMGGDDNRHLGVSAMKMKKMKGRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNELEDSQSPSELSSFFW	236

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco7g01657	236	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	88	221	IPR044810	GO:0003700
	Phco7g01657	236	SMART	WRKY_cls	159	218	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Phco7g01657	236	ProSiteProfiles	WRKY domain profile.	154	219	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Phco7g01657	236	MobiDBLite	consensus disorder prediction	221	236	-	-
	Phco7g01657	236	MobiDBLite	consensus disorder prediction	215	236	-	-
	Phco7g01657	236	Pfam	WRKY DNA -binding domain	160	216	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Phco7g01657	236	FunFam	WRKY transcription factor 57	145	219	-	-
	Phco7g01657	236	SUPERFAMILY	WRKY DNA-binding domain	151	218	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Phco7g01657	236	Gene3D	WRKY domain	146	212	IPR036576	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco7g01657	Phco-Chr7	16052515	16055341	Dispersed/Proximal

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Phco7g01657		WRKY	1e-24	CL0274

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phco7g01657	7	16052515	16055341	Phco7g01657	7	16052515	16055341	ECH