Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01653 ATGGAATACTATTTTGGAAACCCTAATTTCCGTCACTCTGCCGTAGATAACATGGCAGCATCTCCCTCCTCTGAGTTCATGATATCTGATTATCTCATGTTGGAAGATGTTGTTGATTATCATCATGAAGAGTATTGGTCACAAAGCACTGAAACTGAATCATCGGAGAAAGCAACCTCCAGCGATGCCAGTCATGGATTTGGTGATGCAACCTCCACCAGCACCAACAACATAAAGTGCAAAAATAAAGGGCTTAAGCGAAGGAAGGCAGAAGTGAGTCAAAGCATCACGTTTAGAACCAGATCGCAGCTTGAGATTATGGATGATGGATATAAATGGAGGAAGTACGGAAAGAAGACAGTGAAGAACAATTCCAACCCAAGGAACTACTACAAGTGTTCAGGTGAAGGATGCATTGTGAAGAAAAGGGTGGAAAGGGACAGAAATGACTCCAGCTATGTTTTAACAACGTATGTAGGCATCCACAATCACGAGGCCCCGTCTTCCTATTACACCCAAATGTCTTTGCTGCATTCTGATGATTGGAACCATCACCCTTCTGCAACTCAAAACTCATCCTAG 582 0.4296 MEYYFGNPNFRHSAVDNMAASPSSEFMISDYLMLEDVVDYHHEEYWSQSTETESSEKATSSDASHGFGDATSTSTNNIKCKNKGLKRRKAEVSQSITFRTRSQLEIMDDGYKWRKYGKKTVKNNSNPRNYYKCSGEGCIVKKRVERDRNDSSYVLTTYVGIHNHEAPSSYYTQMSLLHSDDWNHHPSATQNSS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01653 193 SMART WRKY_cls 107 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g01653 193 MobiDBLite consensus disorder prediction 48 82 - -
Phco7g01653 193 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 40 183 IPR044810 GO:0003700
Phco7g01653 193 SUPERFAMILY WRKY DNA-binding domain 99 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco7g01653 193 ProSiteProfiles WRKY domain profile. 102 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g01653 193 Gene3D WRKY domain 91 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco7g01653 193 Pfam WRKY DNA -binding domain 108 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g01653 193 MobiDBLite consensus disorder prediction 51 80 - -
Phco7g01653 193 FunFam WRKY transcription factor 57 93 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01653 Phco-Chr7 15981363 15983687 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco7g01653 WRKY 1.1e-21 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01653 7 15981363 15983687 Phco7g01653 7 15981363 15983687 ECH
Phco2g00607 2 5956067 5960558 Phco7g01653 7 15981363 15983687 PCT