Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01628 ATGACTTCCCCACCCAACCTCTTCATCTCGCTTCTTCTTCTTCTTCTTCTCTTCTTCACTATCTTCTCCGCTTCTTCCTCCGCCTCACTACCGGAGCTCCGATCTCTCATGGAATTCAAGAAAGGGATAACTCAAGATCCGCACAACCTTCTAGACTCCTGGACTCCGGCGGCGGTGGCCGAGGCCGCCACCGCCTGTCCTACTACCTGGCAGGGCGTTGTTTGCGATGAGGAGTCCGGCAACGTCACCGGAATCGTCCTCGACCGCCTCCGCCTCGGCGGTGAGCTCAAGTTCCACACTCTCCTCGACCTCAGGATGCTCAGAAACCTCTCGCTCTCCGGCAACGACTTCACCGGAAGGTTGCCTCCCTCCCTGGGGTCGCTCTCCTCGCTGCAGCATTTGGATCTTTCGCAGAACAAGTTCTACGGCCCCATTCCCGCGCGGATCAACGACCTTTGGGGTCTCAATTACCTCAATTTGTCCAACAACCAGTTCAAGGGTGGCTTCCCCAGTGGCCTCTCCAACCTTCAGCAGCTCCGAGTTCTCGATTTGCATGCCAATGCTCTCTGGGCCGAAATTGGGGACGTCCTCTCTACGCTCCGGAATGTGGAGCGTGTCGATTTGAGTCTTAACCAGTTCTTTGGCGGACTTTCCCTCACAGTGGAGAATGTTTCTGGATTGGCCAATACAGTGCATTTTCTTAACCTCAGTCACAACAACTTGAACGGTCACTTCTTTATGAACTCCACCATTGGCCTGTTTCGCAACTTGCAAGTTTTGGACTTGAGTAATAATTCCATCACCGGGGAACTTCCTTCTTTTGGCTCATTACCCACACTTCGCGTTCTTAGGCTTCCCCGGAACCAATTGTTTGGCTCCGTGCCCGAGGAGTTGTTGCAGACTTCAGTGCCGCTGGAAGAATTGGATCTTAGCGTCAACGGGTTTACCGGCTCAATCGCTGTAATCAACTCTACAAGTTTAAATATTTTGAATCTTTCATCCAATAGTTTATCAGGATCCTTGCCAACTTCGTTGAAAAGATGTACTGTCATTGACATCAGCAGGAATATGTTATCTGGTGACATTTCTGTTATACAGAACTGGGAAGCCCCCCTGGAGGTTATTAATCTGAGTTCAAACAAGCTGTCAGGATCCTTGCCTCCTACTTTAGGAACCTATTCAAAATTGTTTACCGTTGATTTAAGTTTAAATGAGCTCAATGGATCCATTCCACGAGGTTTAGTTACTTCATCATCAGTGACAAGATTGAATCTTTCTGGAAATAAACTTACAGGGCAACTTCTGCTTCAAGGTTCAGGAGCCAGTGAGTTACTCCTTATGCCTCCTTATCAACCAATGGAGTATCTTGATGTATCTAATAACTCCTTAGAAGGTGCCTTGCCTTCTGAGATAGATAGGATGAGTGTGCTCAAACTGCTGAATGTGGCTAGGAATGAGTTTTCTGGACAGCTGCCAAATGAATTGAACAAACTTCTTTATTTGGAGTACCTTGATTTGTCTAACAACAAATTTTCTGGAAATATTCCTGACAAGCTTTCATCCAGCTTAACTGTATTTAACGTGTCCAATAATGATCTATCTGGTCGAGTTCCTGAAAATTTGCGGCAGTTCTCTCCTTCATCCTTTCGCCCAGGAAATGGAAAGTTAATGTTACCAAATGATTCTCCTGAGACTTCTTCCGTGCCTGATAACATTCCAGATAACGGTAGACATCATAGTTCAAAGGGTAATATCAGGATAGCAATTATTCTTGCCTCCGTGGGTGCTGCTGTTATGATTGCTTTTGTTTTATTAGCTTATCATCGAACACAACTAAAAGAATTTCATGGAAGAAGTGAGTTCACTGGGCAAAATACCAGAAGAGATGTCAAGTTAGGAGGACTTTCTAGGTCTTCCCTCTTCAAGTTCAATACAAATGTTCAACCCCCAACGACTTCATTGAGCTTTTCAAATGACCACCTTCTGACTTCCAATTCGAGGTCACTCTCTGGTGGACAGTCAGAGTTTGTAACTGAAATTTCTGAGCATGGCTTGCCTCAGGGAATGGTGGCTACTAGTTCAGCTTCTGTAAATCTTAATTTGATGGATAACCCTCCCACTTCATCTGGAAGGAAGTCTTCTCCTGGTTCTCCATTGTCGTCCTCACCCCGTTTCATAGAGACCTGTGAAAAGCCAGTGATGTTGGATGTTTACTCACCAGATCGGTTGGCTGGGGAATTGTTTTTCCTGGATTCTTCCCTAGCATTCACTGCAGAGGAATTATCTCGAGCCCCAGCTGAAGTTCTTGGCAGAAGTAGCCATGGCACTTTATATAAAGCAACTTTGGACAGTGGTCATATGTTGACTGTAAAGTGGCTACGGGTGGGATTGGTGAAACATAAAAAGGAATTTGCTAGAGAAGTTAAAAGGATTGGTTCTATGAGGCATCCAAACATTGTCCCATTACTAGCATACTATTGGGGGCCTAGGGAACAAGAAAGGCTTCTTTTAGCTGACTATATACACGGGGACAACTTGGCCCTTCATCTCTATGAGAGCACACCCCGGAGGTACTCCCCATTATCATTCAGCCAGAGAATAAGAGTTGCTGTTGATGTTGCACGATGTCTTCTATACCTTCATGACCGAGGACTTCCCCATGGAAATCTGAAGCCCACGAATATAGTGTTAGCAGGCCCTGATTTCAATGCTCGTCTTACTGACTATGGTCTGCACCGGCTGATGACGCCGGCTGGAATTGCAGAGCAGATACTCAATCTTGGAGCACTAGGATACCGTGCTCCGGAACTTGTTACTGCATCCAAACCGGTTCCATCCTTTAAGGCGGATGTGTATGCTCTTGGTGTGATCCTAATGGAATTGTTGACAAGAAAAAGTGCAGGTGACATAATATCAGGGCAGTCAGGTGCTGTTGATCTTACAGATTGGGTTAGGCTGTGTGAGCGAGAAGGAAGGGTAATGGACTGTATTGACAGAGACATTGCAGGTGGGGAAGAATCCTCGAAAGAGATGGATGAACTGCTTGCAATATCTCTCAGGTGTATTCTCCCTGTAAATGAGAGGCCTAACATCAGACAAGTTTTTGACGATCTGTGTTCAATATCCGTTTGA 3132 0.4598 MTSPPNLFISLLLLLLLFFTIFSASSSASLPELRSLMEFKKGITQDPHNLLDSWTPAAVAEAATACPTTWQGVVCDEESGNVTGIVLDRLRLGGELKFHTLLDLRMLRNLSLSGNDFTGRLPPSLGSLSSLQHLDLSQNKFYGPIPARINDLWGLNYLNLSNNQFKGGFPSGLSNLQQLRVLDLHANALWAEIGDVLSTLRNVERVDLSLNQFFGGLSLTVENVSGLANTVHFLNLSHNNLNGHFFMNSTIGLFRNLQVLDLSNNSITGELPSFGSLPTLRVLRLPRNQLFGSVPEELLQTSVPLEELDLSVNGFTGSIAVINSTSLNILNLSSNSLSGSLPTSLKRCTVIDISRNMLSGDISVIQNWEAPLEVINLSSNKLSGSLPPTLGTYSKLFTVDLSLNELNGSIPRGLVTSSSVTRLNLSGNKLTGQLLLQGSGASELLLMPPYQPMEYLDVSNNSLEGALPSEIDRMSVLKLLNVARNEFSGQLPNELNKLLYLEYLDLSNNKFSGNIPDKLSSSLTVFNVSNNDLSGRVPENLRQFSPSSFRPGNGKLMLPNDSPETSSVPDNIPDNGRHHSSKGNIRIAIILASVGAAVMIAFVLLAYHRTQLKEFHGRSEFTGQNTRRDVKLGGLSRSSLFKFNTNVQPPTTSLSFSNDHLLTSNSRSLSGGQSEFVTEISEHGLPQGMVATSSASVNLNLMDNPPTSSGRKSSPGSPLSSSPRFIETCEKPVMLDVYSPDRLAGELFFLDSSLAFTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVPLLAYYWGPREQERLLLADYIHGDNLALHLYESTPRRYSPLSFSQRIRVAVDVARCLLYLHDRGLPHGNLKPTNIVLAGPDFNARLTDYGLHRLMTPAGIAEQILNLGALGYRAPELVTASKPVPSFKADVYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEREGRVMDCIDRDIAGGEESSKEMDELLAISLRCILPVNERPNIRQVFDDLCSISV 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01628 1043 Gene3D Transferase(Phosphotransferase) domain 1 842 1043 - -
Phco7g01628 1043 SMART LRR_typ_2 176 200 IPR003591 -
Phco7g01628 1043 SMART LRR_typ_2 254 276 IPR003591 -
Phco7g01628 1043 SMART LRR_typ_2 128 152 IPR003591 -
Phco7g01628 1043 SMART LRR_typ_2 104 127 IPR003591 -
Phco7g01628 1043 SMART LRR_typ_2 498 522 IPR003591 -
Phco7g01628 1043 SMART LRR_typ_2 277 301 IPR003591 -
Phco7g01628 1043 FunFam Pollen receptor-like kinase 1 841 1043 - -
Phco7g01628 1043 Gene3D Ribonuclease Inhibitor 193 300 IPR032675 -
Phco7g01628 1043 MobiDBLite consensus disorder prediction 537 579 - -
Phco7g01628 1043 SUPERFAMILY Protein kinase-like (PK-like) 766 1038 IPR011009 -
Phco7g01628 1043 Gene3D Ribonuclease Inhibitor 301 566 IPR032675 -
Phco7g01628 1043 Pfam Leucine rich repeat N-terminal domain 32 76 IPR013210 -
Phco7g01628 1043 Pfam Protein kinase domain 767 1034 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01628 1043 ProSiteProfiles Protein kinase domain profile. 763 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01628 1043 PANTHER OS07G0626500 PROTEIN 12 107 - -
Phco7g01628 1043 Gene3D Phosphorylase Kinase; domain 1 744 840 - -
Phco7g01628 1043 Gene3D Ribonuclease Inhibitor 32 192 IPR032675 -
Phco7g01628 1043 MobiDBLite consensus disorder prediction 699 724 - -
Phco7g01628 1043 FunFam Leucine-rich repeat receptor protein kinase EMS1 447 540 - -
Phco7g01628 1043 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 226 446 - -
Phco7g01628 1043 SUPERFAMILY RNI-like 323 543 - -
Phco7g01628 1043 SUPERFAMILY L domain-like 66 362 - -
Phco7g01628 1043 ProSiteProfiles Leucine-rich repeat profile. 256 278 IPR001611 GO:0005515
Phco7g01628 1043 FunFam Nuclear pore complex protein NUP107 29 195 - -
Phco7g01628 1043 FunFam Leucine-rich repeat receptor-like protein kinase 748 840 - -
Phco7g01628 1043 Pfam Leucine Rich Repeat 256 273 IPR001611 GO:0005515
Phco7g01628 1043 MobiDBLite consensus disorder prediction 559 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01628 Phco-Chr7 15733107 15738143 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phco7g01628 Pkinase 8.7e-29 CL0016