Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01626 ATGTCCAGAGAAAGGGAGAGATTTGATGAGATAGGGAAGAAGATCAAGAGGGAAGGAGATGTTTCTTCTCAAATGGGAAGAAGACATATGTTAGGCCCTCCTGGAACCCTAAATACCATCACCCCTTGTGCGGCATGTAAGTTGTTGAGAAGAAGATGTGCCCAAGAATGTCCCTTTTCTCCATATTTCTCTCCCCATGAGCCTCAAAAGTTTGCTTCCGTCCACAAAGTTTTTGGTGCCAGCAACGTCTCAAAGATGCTCATGGAAGTACCAGAGTGTCAGAGAGCTGATGCAGCAAATAGTCTAGTTTATGAGGCCAATGTGAGGCTAAGAGACCCTGTGTATGGATGCATGGGTGCAATTTCTGCTTTGCAACAACAAGTTCAATCTTTACAAGCTGAACTTAGTGTAGTGAGGGCTGAAATACTTAAATACAAACTCAGGGAAGCTCACATGATACCCTCCTCTCATCATGTTGCAATGCTTCCTTCAGCTGGGGCCGTTTCAATCGCTGCTCCACCTCCACCACCTCCTCCACCACCACCACTTCCACCTCCTTCTATTCCTCAAACTTCTTCCTCTTCTTCCATGTACATCCAACAGACTGATCCCACCACTTACACCACAATTTCAAGTGATAATATCTCCTATTTTGGTTAA 660 0.45 MSRERERFDEIGKKIKREGDVSSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPECQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELSVVRAEILKYKLREAHMIPSSHHVAMLPSAGAVSIAAPPPPPPPPPPLPPPSIPQTSSSSSMYIQQTDPTTYTTISSDNISYFG 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01626 219 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 38 184 - -
Phco7g01626 219 MobiDBLite consensus disorder prediction 170 189 - -
Phco7g01626 219 ProSiteProfiles LOB domain profile. 41 142 IPR004883 -
Phco7g01626 219 MobiDBLite consensus disorder prediction 170 213 - -
Phco7g01626 219 Pfam Lateral organ boundaries (LOB) domain 42 139 IPR004883 -
Phco7g01626 219 Coils Coil 121 148 - -
Phco7g01626 219 MobiDBLite consensus disorder prediction 190 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01626 Phco-Chr7 15711606 15712695 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco7g01626 LOB 1.7e-40 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01626 7 15711606 15712695 Phco7g01626 7 15711606 15712695 ECH
Phco2g02859 2 57794654 57801535 Phco7g01626 7 15711606 15712695 ECH