Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco7g01616 | ATGTTGGCCTTCTCCAAGTTCAGGAAGGCAGCGGAGGTCTCCTGTGTATTCTGTCGAAACCAAAAGCCTCCCACATACCTCCGAAGATTTTCCCTTCCGTCCGAGGAACCTCCCACTTCGGACCCCCATTTGCCTCTTCGTCTCTGCATCTCGGTGGCCCTCAAGTTAGGGGCTTTCTCCACCCTCAAGTACCGTGGCTTGGTGAGTGAGGTCCTTTGCACCAACAACTGGTTTTCCCTTTACTGGGAAGCCCTCGAGCATATTAAGAAATCCGGAGTTTTTATATCTTCTGATTCGGTTTATGTTTTGATACGGGCGTATTGGCAAGTGGGTCTCCCCGAGAAGGCTATAGAGTCGTTTGGTAGAATGGGTGAGGTTGGTTGCATGCCTGATGCTCATGCCTATAACATCATTTTGGATATTGCGTTTAAGAAAGAGTTGTTTGTCCTGGCTCTTGCGGTGTATAATCTGATGCTTAAGTCCAATTGTTGTCCTAGTGAACGCATTTATAACATGTTGATTGGTGGGTTTTGTAGAAGTGAGGATGTTAATGGTGCGCTTGTAATGCTCGATGAGATGGGCCAAAGGGATGTAGAGCCTAGTGAGATGACATATTTTGCTATTGTTTTTGGTCTGTGTCGTGCGAGGAGGGTAAATGAGGCACACAGGATGTTTAATGTGATGAAAGAACGTGGGTGCAAGCTTAATTCGATGTCTTATTGTGTTTTGATTAATGAGTATTGCAAGATGGGGAGGTCAGATGAAGCCGTTTCGATTCTGCAATTGTTAGAGAAAGACGGGTTACCTCTTGATATAAAGGGCTACAGTCATCTGATTGCTGGCTTTTTTAGGGAAAGGAGATACAATGAAGCGCATTCGTGGTATGGAAGGATGCTTAAGAAGGGTATTGTTCCAGATGTTGTTTTGTACACAGTTATGATACGGGGTTTGTCGAGCGAGGGCAGGATTGGTGAAGCTGTGAAGATGTTTTGTGAGATGACCCAGCAAGGCTTAGTTCCTGATGCTGTTTGTTACAATGAAGTTATTAAAGGTTTCTGTGACGCTGGTCTTCTGGATCGAGCACGATCTCTCCAACTTCAAATTTCTGAGCATGAAGGGTTTCACAATGTCTGCACGCATACCATTCTCATCTGCGACCTGTGTAAGAGAGGAATGGTTGACGAGGCACAAGAAATATTTAATCGGATGGAGAATTCTGGATGTTTTCCTTCACTTGTAACCTTCAATACTCTTATATATGGACTGTGCAAGGCTGGTAAACTGGAGGAGGCACATCTCATGTTGTACAAGATGGAGATGGGGAGAAGTCCTTCGTTATTCTTCCGGCTTTCTCGGGGTTCTAATCAGGTTTTTGATGGTGTTAGTCTCCGGAAAAAGGTGGAGCAAATGTGTGAAACTGGACAACTTTTGGATGCTTACAAGTTTCTGATACAACTTGCTGATAGTGGGGTTATGCCTGACATTGTGACGTACAATGTTCTACTCTACGGCTTTTGCATAGCTTCTAAGCTTAATGGTGCGTTAAAGCTTTTCAAGGATATGCAAAACAAGGGGCCATCACCTGACTCTGTTACTTATGGGACACTGATTGATGGGCTTTTCAGAGTTGGCAGAGAAGAAGACGCCCTGAAGATGTATGAGCATATGCTGAAGCATGGATGTCAACCTAGCTTTGAAGTTTATAAATCCCTTATGACTTGGTTGTCTAGAAATAAGAAGGTCTCACAGGCCATCAGTTTTTATTTGAGTTTTTTAAAGAACCTTCGTGGCAGGGAAGGTGATTCAATCAATGTTTTGGAGGGATATTTTGTCAGAGGAGAAGTGGAACAGGCAATTCAAGGTTTACTAGAACTGGACTTCAGGTTTAGAGATTTTAATTTAGCTCCATATACTATTCTACTTATTGGATTTTGTCAGGCAAATCAATTAGATGAAGCATTGATTATATTTTCTGTTCTTGATAAGTTTAATATCAATATCAATCCTCCAAGCTGTGTATATTTGATCGAAGGTCTCTGTAGAAAAGGAAGGCTGGATGATGCAGTAAACATCTTTCTTTACGCTCTTGAGAAAGGTTTTGTGATGCGGTCAAGAATTTGTGAGCGGCTCCTCAAGTGTCTATTCTGTTCCCCAGATAAAAGGGATTATGCTATTGATCTTGTTCGTTGGATGGAGTCTGCTGGATACCATTTAAATAATTTTGGTTGGTATAAAACGCAGCTTGTACAAAGCAGAACAAGCAATACGAATTGA | 2274 | 0.4252 | MLAFSKFRKAAEVSCVFCRNQKPPTYLRRFSLPSEEPPTSDPHLPLRLCISVALKLGAFSTLKYRGLVSEVLCTNNWFSLYWEALEHIKKSGVFISSDSVYVLIRAYWQVGLPEKAIESFGRMGEVGCMPDAHAYNIILDIAFKKELFVLALAVYNLMLKSNCCPSERIYNMLIGGFCRSEDVNGALVMLDEMGQRDVEPSEMTYFAIVFGLCRARRVNEAHRMFNVMKERGCKLNSMSYCVLINEYCKMGRSDEAVSILQLLEKDGLPLDIKGYSHLIAGFFRERRYNEAHSWYGRMLKKGIVPDVVLYTVMIRGLSSEGRIGEAVKMFCEMTQQGLVPDAVCYNEVIKGFCDAGLLDRARSLQLQISEHEGFHNVCTHTILICDLCKRGMVDEAQEIFNRMENSGCFPSLVTFNTLIYGLCKAGKLEEAHLMLYKMEMGRSPSLFFRLSRGSNQVFDGVSLRKKVEQMCETGQLLDAYKFLIQLADSGVMPDIVTYNVLLYGFCIASKLNGALKLFKDMQNKGPSPDSVTYGTLIDGLFRVGREEDALKMYEHMLKHGCQPSFEVYKSLMTWLSRNKKVSQAISFYLSFLKNLRGREGDSINVLEGYFVRGEVEQAIQGLLELDFRFRDFNLAPYTILLIGFCQANQLDEALIIFSVLDKFNININPPSCVYLIEGLCRKGRLDDAVNIFLYALEKGFVMRSRICERLLKCLFCSPDKRDYAIDLVRWMESAGYHLNNFGWYKTQLVQSRTSNTN | 757 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco7g01616 | 757 | NCBIfam | pentatricopeptide repeat | 207 | 236 | IPR002885 | - | |
| Phco7g01616 | 757 | NCBIfam | pentatricopeptide repeat | 169 | 202 | IPR002885 | - | |
| Phco7g01616 | 757 | NCBIfam | pentatricopeptide repeat | 378 | 411 | IPR002885 | - | |
| Phco7g01616 | 757 | NCBIfam | pentatricopeptide repeat | 308 | 342 | IPR002885 | - | |
| Phco7g01616 | 757 | NCBIfam | pentatricopeptide repeat | 531 | 564 | IPR002885 | - | |
| Phco7g01616 | 757 | NCBIfam | pentatricopeptide repeat | 134 | 167 | IPR002885 | - | |
| Phco7g01616 | 757 | NCBIfam | pentatricopeptide repeat | 496 | 529 | IPR002885 | - | |
| Phco7g01616 | 757 | NCBIfam | pentatricopeptide repeat | 275 | 307 | IPR002885 | - | |
| Phco7g01616 | 757 | NCBIfam | pentatricopeptide repeat | 413 | 439 | IPR002885 | - | |
| Phco7g01616 | 757 | NCBIfam | pentatricopeptide repeat | 239 | 271 | IPR002885 | - | |
| Phco7g01616 | 757 | Pfam | PPR repeat family | 376 | 424 | IPR002885 | - | |
| Phco7g01616 | 757 | Pfam | PPR repeat family | 305 | 354 | IPR002885 | - | |
| Phco7g01616 | 757 | Pfam | PPR repeat family | 204 | 249 | IPR002885 | - | |
| Phco7g01616 | 757 | Pfam | PPR repeat family | 493 | 541 | IPR002885 | - | |
| Phco7g01616 | 757 | PANTHER | MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE | 605 | 741 | - | - | |
| Phco7g01616 | 757 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 166 | 200 | IPR002885 | - | |
| Phco7g01616 | 757 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 494 | 528 | IPR002885 | - | |
| Phco7g01616 | 757 | Gene3D | Tetratricopeptide repeat domain | 368 | 441 | IPR011990 | GO:0005515 | |
| Phco7g01616 | 757 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 668 | 702 | IPR002885 | - | |
| Phco7g01616 | 757 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 236 | 270 | IPR002885 | - | |
| Phco7g01616 | 757 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 201 | 235 | IPR002885 | - | |
| Phco7g01616 | 757 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 96 | 130 | IPR002885 | - | |
| Phco7g01616 | 757 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 411 | 445 | IPR002885 | - | |
| Phco7g01616 | 757 | Pfam | Pentatricopeptide repeat domain | 103 | 141 | IPR002885 | - | |
| Phco7g01616 | 757 | Gene3D | Tetratricopeptide repeat domain | 64 | 146 | IPR011990 | GO:0005515 | |
| Phco7g01616 | 757 | Gene3D | Tetratricopeptide repeat domain | 250 | 367 | IPR011990 | GO:0005515 | |
| Phco7g01616 | 757 | Gene3D | Tetratricopeptide repeat domain | 459 | 592 | IPR011990 | GO:0005515 | |
| Phco7g01616 | 757 | Gene3D | Tetratricopeptide repeat domain | 147 | 249 | IPR011990 | GO:0005515 | |
| Phco7g01616 | 757 | Gene3D | Tetratricopeptide repeat domain | 593 | 722 | IPR011990 | GO:0005515 | |
| Phco7g01616 | 757 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 271 | 305 | IPR002885 | - | |
| Phco7g01616 | 757 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 376 | 410 | IPR002885 | - | |
| Phco7g01616 | 757 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 131 | 165 | IPR002885 | - | |
| Phco7g01616 | 757 | Pfam | PPR repeat | 275 | 303 | IPR002885 | - | |
| Phco7g01616 | 757 | Pfam | PPR repeat | 637 | 660 | IPR002885 | - | |
| Phco7g01616 | 757 | Pfam | PPR repeat | 675 | 700 | IPR002885 | - | |
| Phco7g01616 | 757 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 529 | 563 | IPR002885 | - | |
| Phco7g01616 | 757 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 306 | 340 | IPR002885 | - | |
| Phco7g01616 | 757 | Pfam | PPR repeat | 162 | 193 | IPR002885 | - | |
| Phco7g01616 | 757 | SUPERFAMILY | HCP-like | 473 | 699 | - | - |