Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01607 ATGGCAAAGCAGAAACTCATATACACTTTTTTGGTGTACTTGGTGATTCTCTTCTTCTTTGCTTCATCTGTTTCGGCTTCAGCGAGAGTTGCGCCTCTTTTGCAGAGCTACGGGAACCCCATTTTCGGATCAAACTTTCATTCTGTTTACGACACTTCAAATTACGGTCCGTTTCAGCTGAGTAATGGATTGGCTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAGTGAAAGGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACAGGATTGGCTGATTTAGGTTATGTATATGTCAACATAGATGATTGCTGGTCTGCTGTGAGCAGAAATCTGAAGGGTCAACTTGTTCCTGATCCTAAGACATTTCCATCTGGAATCAAAGCTCTTGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGAATATATTCGGATGCTGGGATGTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACTTATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAACTGTTACAATCTGGGTATCCCTCCCAAAAAACGTTATCCACCTATGCGTGATGCTCTCAATGCAACTGGACGTAAAATTTTCTACTCACTATGTGAATGGGGCGTTGATAACCCTGCCTTGTGGGCAGACAAGGTAGGTAACAGCTGGCGCACAACTGAAGACATCAATGATTCGTGGGCAAGCATGACAACCATTGCCGATCTTAATGATAAATGGGCTGCATATGCTGGTCCTGGGGGATGGAATGACCCAGATATGTTGGAAGTTGGGAATGGTGGCATGACTTACCAGGAATACCGTGCTCACTTCAGCATCTGGGCTTTAGCGAAGGCACCACTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGGGCAATGAAGAAGTCATTGCCATCAATCAAGACTCACTTGGAGTCCAGGGAAGAAAAGTTCAAGTTGCTGGAGTAGATGGTTGTGGACAGGTTTGGGCTGGTCCTTTGTCAGGAAATCGATTGGCTGTTGCTCTCTGGAATCGGTGCTCAGAAGTTGTTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGTGGTTCATGTTTCTGTGAGGGATCTGTGGCAGCACAAGTTAGTAACTGGAGATGCAGTATCATCATTCAGTGCTCGAGTTGATATCCACGACTCTCAACTGTACATTTTCACTCCATTTATAGTTTCTCACTCTGTAGAGTAG 1299 0.4388 MAKQKLIYTFLVYLVILFFFASSVSASARVAPLLQSYGNPIFGSNFHSVYDTSNYGPFQLSNGLAKTPQMGWNSWNFFACNISERVIKETADALVSTGLADLGYVYVNIDDCWSAVSRNLKGQLVPDPKTFPSGIKALADYVHGKGLKLGIYSDAGMFTCQVRPGSIFHETYDADLFASWGVDYLKYDNCYNLGIPPKKRYPPMRDALNATGRKIFYSLCEWGVDNPALWADKVGNSWRTTEDINDSWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALAKAPLLIGCDVRNLTAETLEILGNEEVIAINQDSLGVQGRKVQVAGVDGCGQVWAGPLSGNRLAVALWNRCSEVVTITASWEALGLESVVHVSVRDLWQHKLVTGDAVSSFSARVDIHDSQLYIFTPFIVSHSVE 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01607 432 Gene3D - 333 424 IPR013780 -
Phco7g01607 432 CDD GH27 68 330 IPR002241 GO:0004553|GO:0005975
Phco7g01607 432 Gene3D Aldolase class I 60 332 IPR013785 -
Phco7g01607 432 PRINTS Glycosyl hydrolase family 27 signature 98 113 IPR002241 GO:0004553|GO:0005975
Phco7g01607 432 PRINTS Glycosyl hydrolase family 27 signature 286 307 IPR002241 GO:0004553|GO:0005975
Phco7g01607 432 PRINTS Glycosyl hydrolase family 27 signature 200 218 IPR002241 GO:0004553|GO:0005975
Phco7g01607 432 PRINTS Glycosyl hydrolase family 27 signature 265 284 IPR002241 GO:0004553|GO:0005975
Phco7g01607 432 PRINTS Glycosyl hydrolase family 27 signature 62 81 IPR002241 GO:0004553|GO:0005975
Phco7g01607 432 PRINTS Glycosyl hydrolase family 27 signature 173 190 IPR002241 GO:0004553|GO:0005975
Phco7g01607 432 PRINTS Glycosyl hydrolase family 27 signature 139 160 IPR002241 GO:0004553|GO:0005975
Phco7g01607 432 SUPERFAMILY (Trans)glycosidases 60 330 IPR017853 -
Phco7g01607 432 FunFam Alpha-galactosidase 333 425 - -
Phco7g01607 432 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 11 424 IPR002241 GO:0004553|GO:0005975
Phco7g01607 432 SUPERFAMILY Glycosyl hydrolase domain 332 424 - -
Phco7g01607 432 ProSitePatterns Alpha-galactosidase signature. 103 119 IPR000111 GO:0004553|GO:0005975
Phco7g01607 432 Pfam Alpha galactosidase C-terminal beta sandwich domain 347 421 IPR041233 -
Phco7g01607 432 FunFam Alpha-galactosidase 60 332 - -
Phco7g01607 432 Pfam Alpha galactosidase A 67 330 IPR002241 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01607 Phco-Chr7 15469367 15476310 Dispersed/Transposed