Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01599 ATGTCGTTCGCTCACCACCGTCGAACCCAATCGGAGATGCATTTCCGGATCACCGACGACTTCGACCTCGAGGTCGATCTCTCTCCTCCGCATTTCCAAGATCCCACCCCGCCCAACCAATTCGGACCCAAACCCGAATCTCCGCCGCACGAGACCGCCCGCTCGGGTCACCGGAGGAGTAATTCCGCCGACACCTCTTCCTCCTCGCTGCTCGAAGGCATTGAGGCCAAGAAGGCCTTGTCCCCCGATAAGCTCGCCGAACTCTGGACCGTTGATCCCAAACGTGCCAAGAGGATTCTCGCTAACCGTCAATCCGCGGCGCGCTCTAAAGAGAGGAAAGCTTGTTACGTGTCGGAGCTTGAAAGGAAATTTCAATCCCTTCAAACGGAAGCAACCACTCTCTCTGCTCAATTAAGTCTATTCCAGAGAGATACAACTGGTCTGAGTTCTGAAAATACGGAGTTGAAGCTTAGGTTACAAGCCATGGAACAACAAGCTAAGTTGTGTGATGCTCTAAATGAAGCACTGAAGAAAGAAGTTGATAGGCTGAGGGTTGCAACTGGAGATATGGCAATGCCTGCTGATAACTATGGCTTGGGAATGCATCAACTTACATATTCTCAAGGACCGTTCTTCTCACATCAGTCACAACATGGCCAGAGTGCAGTTCAGGCCATGCAAATGCCGCAGATGCATTCACTCTCATCTAATGTGTCTACTTCCCATGAGCCTCTGTTTGATCTAGACATTCCCTATGATATGTCCGAAATGTTGTCGAATGAATCTATCGGGCAGTTTCAGGGGCTGGACATAGGCAACGGGGTTTCTCATGTTCTGATGCCAGATTATCCCTCCAATTTCTGTTAA 867 0.5006 MSFAHHRRTQSEMHFRITDDFDLEVDLSPPHFQDPTPPNQFGPKPESPPHETARSGHRRSNSADTSSSSLLEGIEAKKALSPDKLAELWTVDPKRAKRILANRQSAARSKERKACYVSELERKFQSLQTEATTLSAQLSLFQRDTTGLSSENTELKLRLQAMEQQAKLCDALNEALKKEVDRLRVATGDMAMPADNYGLGMHQLTYSQGPFFSHQSQHGQSAVQAMQMPQMHSLSSNVSTSHEPLFDLDIPYDMSEMLSNESIGQFQGLDIGNGVSHVLMPDYPSNFC 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01599 288 Coils Coil 117 137 - -
Phco7g01599 288 MobiDBLite consensus disorder prediction 24 69 - -
Phco7g01599 288 FunFam probable transcription factor PosF21 93 146 - -
Phco7g01599 288 MobiDBLite consensus disorder prediction 31 45 - -
Phco7g01599 288 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 92 155 IPR004827 GO:0003700|GO:0006355
Phco7g01599 288 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 5 233 - -
Phco7g01599 288 Pfam bZIP transcription factor 94 152 IPR004827 GO:0003700|GO:0006355
Phco7g01599 288 SMART brlzneu 90 154 IPR004827 GO:0003700|GO:0006355
Phco7g01599 288 Coils Coil 159 179 - -
Phco7g01599 288 CDD bZIP_plant_RF2 95 144 IPR044759 GO:0003700|GO:0006355
Phco7g01599 288 Gene3D - 93 166 - -
Phco7g01599 288 SUPERFAMILY Leucine zipper domain 94 148 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01599 Phco-Chr7 15332464 15335426 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco7g01599 bZIP_1 7.7e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01599 7 15332464 15335426 Phco7g01599 7 15332464 15335426 ECH