Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01593 ATGAAGATGTCAAAGGATGGTGATGTTACTCAAGAACCATCAAATAATAAGGTAATTGATTCATCTATTTTTGACTCAAAATGTGTAGATAAGAAAAATGTCAATGCAAAAGAAGGAAAAAGTTTCTCTTGCAACTATTGTAAGAAAGAGTTCTCTACCTCACAAGCTTTAGGAGAACATCAAAATGCACACAAACAAGAACGTGCTTTGGCAAAAAGTGATCAAGGTTTTGATGTTAGTGGGTTAGGACACTTTCCTTACTCTTATTATCCAAATTTTTGTAACTCTCCTTCCCTTTGTAGAGGGTCCTTTAACAAGGCACTAGGAATTCGAAAGGACTCCATGATTCACAAACTTCCTTGGACTCCAAGATATGAACATCAATTATTTAAAAGGGATCATGGCACATCAAATTCGTCAATATTTGATGATGGGTTTGGACTTATGAAATGTGATTATTCAACTATGAATAATGATGCAACTCCAAATTTGAAGCTAGAGAAAGATAATGGTAAAATCAGTGTTGAAATTGAAACACTCCCTCTTTTTATAGATGTTGTCAGTCGTTCATTAAGTCAATTGAGAAACATGTCAATGCTTTCAACAACAAATCTTGATACAAAAGAAACTTCTGGTGAAGCACCTTGCAATCTTGATTTGACACTCAAACTTTAA 675 0.3393 MKMSKDGDVTQEPSNNKVIDSSIFDSKCVDKKNVNAKEGKSFSCNYCKKEFSTSQALGEHQNAHKQERALAKSDQGFDVSGLGHFPYSYYPNFCNSPSLCRGSFNKALGIRKDSMIHKLPWTPRYEHQLFKRDHGTSNSSIFDDGFGLMKCDYSTMNNDATPNLKLEKDNGKISVEIETLPLFIDVVSRSLSQLRNMSMLSTTNLDTKETSGEAPCNLDLTLKL 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01593 224 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 18 224 IPR044246 GO:0009788
Phco7g01593 224 Pfam C2H2-type zinc finger 42 66 - -
Phco7g01593 224 ProSiteProfiles Zinc finger C2H2 type domain profile. 42 69 IPR013087 -
Phco7g01593 224 Gene3D Classic Zinc Finger 20 78 - -
Phco7g01593 224 ProSitePatterns Zinc finger C2H2 type domain signature. 44 64 IPR013087 -
Phco7g01593 224 SUPERFAMILY beta-beta-alpha zinc fingers 39 69 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01593 Phco-Chr7 15248121 15248795 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco7g01593 zf-C2H2_6 4.9e-06 CL0361