Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01592 ATGAAGATGTCAAAGGATGATGATATTACTCAAGAACCATCAGATGAGAAGGTAATTGATTCAACTATTTCTCACTCAAAAGGTGCAATTAAGAAGAATACAAAGGTAGAAAAAAGAAAGACTTTTTCTTGCAATTATTGCAACAAAGAGTTTTCTACCTCACAAGCTTTGGGAGGACACCAAAATGCACACAAACATGAACGTGTTGTTGCAAAACATTGTCAAGGTTTTGATGTTAAAGGGTTAACACAATTTCCTTATTACCCATATTATTCAAGTTTTTATAACTCTCATTCCCTGCATGGAAGATCCTTTGGTGACGCACTTGGAATTCGAAGTGACTCCATGATTCACAAGATTCCTAGGACTTCAAGGTATGAAAATTCATTTTCTAAAAGGGATCATCAGAAGTTAATATTTGATGGATTTAGAAATATGAAAAATGATTATCCAAATATAAAGAGTGATGCAACTCCTAGTTTGAAGTTGGAAGATGACAATGATAGAATCAATCTTGAAACACTGTCTCTTTTTACAAATGATGCTACCACTTCATCAAGCCAACTTAGAAAGATGAATACTCTTCTTGCAACAACAGAAATTGATGATCATCATGTTCCAAAAGAAACTTCCGATGAACCATCTTGTAATCTTGATTTGTCATTGAAGCTTTAA 675 0.3348 MKMSKDDDITQEPSDEKVIDSTISHSKGAIKKNTKVEKRKTFSCNYCNKEFSTSQALGGHQNAHKHERVVAKHCQGFDVKGLTQFPYYPYYSSFYNSHSLHGRSFGDALGIRSDSMIHKIPRTSRYENSFSKRDHQKLIFDGFRNMKNDYPNIKSDATPSLKLEDDNDRINLETLSLFTNDATTSSSQLRKMNTLLATTEIDDHHVPKETSDEPSCNLDLSLKL 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01592 224 MobiDBLite consensus disorder prediction 1 21 - -
Phco7g01592 224 ProSiteProfiles Zinc finger C2H2 type domain profile. 42 69 IPR013087 -
Phco7g01592 224 SUPERFAMILY beta-beta-alpha zinc fingers 39 70 IPR036236 -
Phco7g01592 224 Pfam C2H2-type zinc finger 42 66 - -
Phco7g01592 224 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 15 224 IPR044246 GO:0009788
Phco7g01592 224 Gene3D Classic Zinc Finger 20 80 - -
Phco7g01592 224 MobiDBLite consensus disorder prediction 205 224 - -
Phco7g01592 224 ProSitePatterns Zinc finger C2H2 type domain signature. 44 66 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01592 Phco-Chr7 15240640 15241314 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco7g01592 zf-C2H2_6 9.9e-07 CL0361