Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01590 ATGTCAAAGGATGATGATGTTATTCAAGAACCATCAAATAATAAGGTAATTGATTCATCTACTTCTGATTCAATAGGTGTAGATAAGAAGAATATCAATACAAAAGAAGGAAAGAGTTTCTCTTGCAATTATTGTAAGAAAGAGTTCTCTACCTCACAAGCTTTGGGAGGACATCAAAACTCACACAAACAAGAACGTGTTTTGGCAAAATGTGATCAAGGTTTTGATGTTGGTGTGTTAGGACACTTTCCTTACTCTTATCCAAGTTTTTATAACTCTCTTTCCCTTTCTAGAGAGTCCTCTAACAAGGAACTAGGGGTTCGAAAGGACTCCATGATTCACAAACTTTCTTGGACTCCAAGATATGAACATCTATTGTTTAAAAGGGATCATGGCTCATTGAGTTCATCAATATTTGATGATGGGTTTGGACTTATGAAATGTGATTATCCAACTATGAAGAGTGATGCATCTCCAAATTTGAAGTTAGAGAAAGACAATGGTAAAACCAATGTTGAAATTCAAACACTCCCTCTTTTTATAGCTGCTGCCAGCACTTCATTAAGTCAATCCAGAAACATGTTAGTGCTCCCAACAACAAATCTTGATACAAAAGACACTTGTTGTGAAACATCTTGTAATCTTGATTTGACACTCAAACTTTAA 666 0.3498 MSKDDDVIQEPSNNKVIDSSTSDSIGVDKKNINTKEGKSFSCNYCKKEFSTSQALGGHQNSHKQERVLAKCDQGFDVGVLGHFPYSYPSFYNSLSLSRESSNKELGVRKDSMIHKLSWTPRYEHLLFKRDHGSLSSSIFDDGFGLMKCDYPTMKSDASPNLKLEKDNGKTNVEIQTLPLFIAAASTSLSQSRNMLVLPTTNLDTKDTCCETSCNLDLTLKL 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01590 221 Gene3D Classic Zinc Finger 18 74 - -
Phco7g01590 221 Pfam C2H2-type zinc finger 40 65 - -
Phco7g01590 221 SUPERFAMILY beta-beta-alpha zinc fingers 37 67 IPR036236 -
Phco7g01590 221 ProSitePatterns Zinc finger C2H2 type domain signature. 42 62 IPR013087 -
Phco7g01590 221 MobiDBLite consensus disorder prediction 12 28 - -
Phco7g01590 221 ProSiteProfiles Zinc finger C2H2 type domain profile. 40 67 IPR013087 -
Phco7g01590 221 MobiDBLite consensus disorder prediction 1 30 - -
Phco7g01590 221 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 14 221 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01590 Phco-Chr7 15207814 15208479 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco7g01590 zf-C2H2_6 4.8e-07 CL0361