Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01589 ATGAAATATTGTGAGAAAAAGAGTCTTGCTCCTCATCAAAATCAAGGTTCAAATTCTAATACTAGAATATTGGTTGATTTCATGAAGATGTCAAAGGATGATGATATTATTCAAGAATCATCAAATAAAAAGGTAATTGATTCATCTATTTCTCACTCAAAAGGTGCAATTAAGAAGAATACAAAGGTAGAAAAAACAAAGACTTTTTCTTGCAATTATTGCAACAAAGAGTTTTCTACCTCACAAGCTTTGGGAGGACACCAAAATGCACACAAACAAGAACGTGTTGTTGCAAAACTTCGTCAAGGTCTTGATGTTAAAGGGTTAGCACAATTTCCTTATTACGCATATTATTCAAGTTTTTATAACTCTCATTCCCTCCATGGAAGATCCTTCAGTGACGCACTTGGAATTCAAAGTGATTCCATGATTCACAAGCATCCTAGGACTTCAAGATATGAGCATTCATTGTTTAAAAAGGATCATGAGAAGTTAATATTTGATGGGTTTAGAAATATGAAAAATGATTATCCAATTATAAAGAGTGATGCAACTTTTTGTTTGAAACCAAAAGATGACAATGATAGAATCAATCTTGAAACATTGTCTTTTTTTACAAATGATGCTACCACTTCATCAAGTCAACTTAGAAAGATGACGACGCTTGGAACAACAGAAATTGTTAATCATTATGTCCCAAAAGAAACTTCCAATGAACCATTTTGCAATCTTGATTTGTCATTGAAGCTTTAA 753 0.3214 MKYCEKKSLAPHQNQGSNSNTRILVDFMKMSKDDDIIQESSNKKVIDSSISHSKGAIKKNTKVEKTKTFSCNYCNKEFSTSQALGGHQNAHKQERVVAKLRQGLDVKGLAQFPYYAYYSSFYNSHSLHGRSFSDALGIQSDSMIHKHPRTSRYEHSLFKKDHEKLIFDGFRNMKNDYPIIKSDATFCLKPKDDNDRINLETLSFFTNDATTSSSQLRKMTTLGTTEIVNHYVPKETSNEPFCNLDLSLKL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01589 250 MobiDBLite consensus disorder prediction 1 20 - -
Phco7g01589 250 Gene3D Classic Zinc Finger 39 108 - -
Phco7g01589 250 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 96 IPR013087 -
Phco7g01589 250 SUPERFAMILY beta-beta-alpha zinc fingers 66 96 IPR036236 -
Phco7g01589 250 ProSitePatterns Zinc finger C2H2 type domain signature. 71 91 IPR013087 -
Phco7g01589 250 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 8 250 IPR044246 GO:0009788
Phco7g01589 250 Pfam C2H2-type zinc finger 69 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01589 Phco-Chr7 15197760 15198512 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco7g01589 zf-C2H2_6 4.2e-07 CL0361