Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01584 ATGGCTGCACCTTCTTCTTCAAATTGGGTCATGGAAAGTGCTCATGATGTTCCTCATGTTTTGGCCGTTGATGACAACCTTATTGATCGAAAACTCGTTGAGAAACTCCTCAGGAATTCTTCTTGCAAAGTTACAACTGCAGAAAATGGGCCAAGGGCATTGGAGTTATTGGGCTTGACAAGTGGTGGACAGAACAGCATGAACGGTAGATCCAAAGTAAATTTGGTAATCACAGACTATTGCATGCCAGGAATGACAGGCTATGAGCTACTTAAGAAAATTAAGGAATCATCTGTAATGAAGGAGGTTCCAGTAGTGATAATGTCTTCTGAGAACATACCAACACGGATTAACAAGTGTCTGGAAGAAGGAGCTCAGATGTTCATCTTAAAGCCCCTCAAACAATCTGATGTAAAAAAACTGACATGTCAGTTAATGAATTGA 444 0.4054 MAAPSSSNWVMESAHDVPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSGGQNSMNGRSKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVIMSSENIPTRINKCLEEGAQMFILKPLKQSDVKKLTCQLMN 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01584 147 ProSiteProfiles Response regulatory domain profile. 19 146 IPR001789 GO:0000160
Phco7g01584 147 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 145 IPR045279 GO:0009736
Phco7g01584 147 FunFam Two-component response regulator ORR5 18 147 - -
Phco7g01584 147 Pfam Response regulator receiver domain 20 140 IPR001789 GO:0000160
Phco7g01584 147 CDD REC_typeA_ARR 20 141 - -
Phco7g01584 147 SUPERFAMILY CheY-like 18 145 IPR011006 -
Phco7g01584 147 SMART REC_2 18 142 IPR001789 GO:0000160
Phco7g01584 147 Gene3D - 19 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01584 Phco-Chr7 15113594 15114745 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco7g01584 Response_reg 2e-22 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01219 3 10860349 10861134 Phco7g01584 7 15113594 15114745 PCT