Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01582 ATGGAAGAGGTAATTAACTCGATTCATCGCGCTTCAGAATTGGTTCAAAGGCTTGAACAAGACCTACCCAACATGGTGAACCAACCAAGGACGCTGTCCTTGTCCATTGATGAAATAACTGAGGCATTCACTGCCGCCAAGGAAAAGCTGTTGCTAATTTCCCAACATAACCAAACGTCGGAATCTCCTCCAATGTTGCTTCATGAAACAACACCGCAGCAGCCTCTGATGGATGCTACTCTGATGCAGGAATGGTTAAGGACTAGTCATGCATTAACGATGGATCAGTTGTTTCAAATGCAACAACGTGCTGCAAGGAGCAGTATGCAGATTGGTGAAATGGGAGGGAGAGAGGTGGAAGATTCAGAGAGAAGCATGGGATCCGAAGGAGATCAAGGGCAAGGAATCCACGCACCTTCACGACCACGAAGAAGAAGCAGGGAAGGTAATCAAGAGAAGAGGAAAATTCTGGTTCCTGCCCCACAGTTTGGAAACACAGAGATGCCACCGGAGGATGGTTTCACTTGGAGGAAATATGGCCAGAAAGAAATACTTGGATCCAAGTACCCAAGGAGTTACTACAGATGCACACATCAGAAGCTATATGAATGCCAAGCCAAGAAGATGGTGCAAAGACTTGATCATAATGCTAACATATTTGAAGTAACATACAGAGGGAAACACACTTGCCATATGTCCTCCACAGCACCATCATCATCATCAGTTCCCCTAGAACAACTTTTGGTGGACATGACACAAAGTAGTAACACCATTTCCTCTCAGTTGTCTCCGTCAGTGAATCTCAGCCTCCTTCCCGGTAGTGGCGGCCCCGCCGCCACCAGTGGCAGGGGCGGAGCCTCCACCTCAAGATTCGGTGGTGATTATCCTGTGGTGGATATGGCTGATGCTATGTTCAACTCTGGTAGCAGCAGTGGCAATAACAGCATGGAATTTCTCTTCTCTCCCGCTGAAGATAAAAGTGATGCAAAATGA 993 0.4703 MEEVINSIHRASELVQRLEQDLPNMVNQPRTLSLSIDEITEAFTAAKEKLLLISQHNQTSESPPMLLHETTPQQPLMDATLMQEWLRTSHALTMDQLFQMQQRAARSSMQIGEMGGREVEDSERSMGSEGDQGQGIHAPSRPRRRSREGNQEKRKILVPAPQFGNTEMPPEDGFTWRKYGQKEILGSKYPRSYYRCTHQKLYECQAKKMVQRLDHNANIFEVTYRGKHTCHMSSTAPSSSSVPLEQLLVDMTQSSNTISSQLSPSVNLSLLPGSGGPAATSGRGGASTSRFGGDYPVVDMADAMFNSGSSSGNNSMEFLFSPAEDKSDAK 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01582 330 Pfam WRKY DNA -binding domain 171 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g01582 330 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 57 250 IPR044810 GO:0003700
Phco7g01582 330 MobiDBLite consensus disorder prediction 309 330 - -
Phco7g01582 330 Coils Coil 1 28 - -
Phco7g01582 330 ProSiteProfiles WRKY domain profile. 171 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g01582 330 MobiDBLite consensus disorder prediction 108 155 - -
Phco7g01582 330 SUPERFAMILY WRKY DNA-binding domain 167 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco7g01582 330 SMART WRKY_cls 170 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g01582 330 Gene3D WRKY domain 160 233 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01582 Phco-Chr7 15089169 15091841 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco7g01582 WRKY 1.6e-25 CL0274