Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01581 ATGCCACCAAATAGAGACCCAATAGCAGTGAGAGTTCTTTCCCCTCCAACTTCCTCAGCCATGAGCAAAAGGGTCATCACAGAGCTTGTTCTGGGTCTCGACTATGCCACTCAGCTCAAGTTTCTGCTTCAGAACCCTGTTGGCCCAGATGGGTCTGTTGCAGCTAAGGAACTTGTGACCAATGTGCAGAGATCTTTCGCTGAAATTCTCTCTATGTTGACTTCTTCCGAGGCTGCAAGTGGTGAAGACGAGGTTGCTCAGAATCTCGTGATTTCCGGGGAAGATGCCTCGCAGGCTGCAAGCATTGATCTCAGGTCTGAGGATTCAACTGAGAGTAGAAAGAGATCATTGCCCCTCTCAAAGGATCGCAGAGGTTCCTACAAAAGAAGGAAGACGGAACAGACATGGTCCATAGTTTCCCAGAGTACTGATGATAATCATGCATGGAGAAAGTACGGACAAAAGGATATTCTAAATTCTCAGTTTCCCAGGAGTTACTTCAGATGCACCAGGAAGTTTGAACAAGGTTGCAAAGCCATGAAACAGGTGCAACGGTTAGAAGAGAATCCTGATATGTACAATATTACGTATATTGGGTTTCACACATGCAAAGACACCCTCAAGGCTCCACAAATGGTCACATATTCTGAAACTTGGGACTCATTTCTTGAGAATTCCCACGCAGACTTAAATGTTCCAAATGAACAAAAGCAACATGATCCTCCTATCAGATCACAAAGCCCAATTGTTAAACAAGAATATCCCAATGATGAGAGTGATCCTACAGATGCCGACCTGTGGTCTGACTTGAAGGATTTTGAACTGTCCAATGAGAAGCCTGCCTTCAAAATAGTCTCTGAAAATGCAGATGCATTCATGTACTGGTTCTCGGAGTTTGGACATGAATGTTGA 912 0.4452 MPPNRDPIAVRVLSPPTSSAMSKRVITELVLGLDYATQLKFLLQNPVGPDGSVAAKELVTNVQRSFAEILSMLTSSEAASGEDEVAQNLVISGEDASQAASIDLRSEDSTESRKRSLPLSKDRRGSYKRRKTEQTWSIVSQSTDDNHAWRKYGQKDILNSQFPRSYFRCTRKFEQGCKAMKQVQRLEENPDMYNITYIGFHTCKDTLKAPQMVTYSETWDSFLENSHADLNVPNEQKQHDPPIRSQSPIVKQEYPNDESDPTDADLWSDLKDFELSNEKPAFKIVSENADAFMYWFSEFGHEC 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01581 303 SMART WRKY_cls 143 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g01581 303 MobiDBLite consensus disorder prediction 232 253 - -
Phco7g01581 303 ProSiteProfiles WRKY domain profile. 144 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g01581 303 SUPERFAMILY WRKY DNA-binding domain 141 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco7g01581 303 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 46 231 IPR044810 GO:0003700
Phco7g01581 303 MobiDBLite consensus disorder prediction 100 132 - -
Phco7g01581 303 Pfam WRKY DNA -binding domain 144 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g01581 303 Gene3D WRKY domain 128 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco7g01581 303 MobiDBLite consensus disorder prediction 106 131 - -
Phco7g01581 303 MobiDBLite consensus disorder prediction 232 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01581 Phco-Chr7 15078137 15080438 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco7g01581 WRKY 3.5e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01165 3 10064381 10072332 Phco7g01581 7 15078137 15080438 PCT