Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01560 ATGGGAGTTGCAGCACAAACGCAGTTACAGTTAGAGAAGCGCGTGTTAGAGGGTTTCAGTTCGAAATCCATGGAATTGAAATGGGTGAGTCGAAGAATCAGCAAAAGCTCACAGCTTGAGAAGACGAAGAAGCCGTTGAGACCGCTTTTCCCAATTTACATTTCCACCGACCCACTCCACGTCGATCCTCACCGTCTCCGAGACCTCTTCGCCGATTGCAACTACTCTACCCAAAGATTTCCCACCCGACCCGGACCTGAACCCGTGGACATCCACAAGCTCCGCATTGCTCTGTCTCACAGCGCCGTGGTTGTCTCCGTCTTCTGCAACCTACGCCACGTAAACGCCGTCGTTCCATATGACGACAATTCATCGTCTTTAGTCGCGGATTTCTTCACGCCGGTTTCTCCTTCACGCGATCAGTTGGTCGGGTTTGGCCGCGCCGTTTCCGATTATGGCCTCACCGCTTCAATTTACGATGTCGTGGTTAGTCCTTCCCTGCAGAGAATGGGAATTGGTCAGATGATAGTTAAAAAAATTGCGAGAGTGCTTACAAATAGAGACATATACGACATAGCAGCCCTTTGCTCAGAGAATGAAAGGTTATTTTTTAAGGCGTGTGGATTTGGGGACGACATTTTGAACTCTACTACCATGATGTACAGAAGAACTGTTCCATTAATAACCCAGGAAGGAGGCTTACAGGAGACAACATCCCTTCTTTTCATTCCTGGACTTTCTATGGGGATAACATGGGTGGAGGTCTGCTTGATATCTGCACATGGACTCCAGCATTCAACCTCACTTTGGAAGCGTCAATGGTTTGCTGTTGGGTGGATTGATCTTAACAGCAAATATTGCACCAAAGTTGTTGATTCAGGGAGTGCAAATCCTGTATGGAGAACCAAGTTTGCCATTCCTGTTGAGGACTCAGCACCAAATCTCCTAGATTTGGCACTGAACGTGGATGTTTACAGTACAGACCCCATATTCTTCATGGAAAAGCTTCATGGCTCAGCAACAGTTTTTCTCAGAGAGTTTCTTGTCAAGCAGGTAAAGAACTCTGAGGTATCCAATTCCAAGCAGCAGGGAGTTGGAAGATACCAATTACGAAAGAAGAAATCTAGCAAACCAAGAGGTTTCATCGATATTTTAATTTGTATTTCTAACGAAAAGAAAGAGCCAAATCCCCACTCAGGAAACAAGGATGAAATTTTGCTCTTAGATAATGGAGGTAGTACTCAATTCAACATGGAGGGAGGAGTAAGGCAAGCATACCGTCGGAAGCCTCAGGCTTCAATCCATCAGCCAGAAGATCATGTACAAACAAACGTCCCAGACTACCATTCAGTACCATTCACCACTACAAACTATTATAATCCATATTTGGGTGAAGCAAGCTACCATGAGATGGGGGAAGCAAGCTACCATGAGATGGGTGAACCGAGCTACCATGAGATGGGTGAACCGAGCTACCATGAGGTGGGGGAAGCAAGCTACCATGAGGCAGCTGGACCAAGCTATCTACTGCCTAGAACAATAACTCCTCCTCCACCGGCTCCACCATCAAATGTTGGCTATATTCCCACCTTTCTCCCAATAAAGAATGGCTTGTCTCCAAGCTACACAGACATGTCAACAACCAGGGCAGCCCCTGGTCAGAGGGTATCTGCAAGAGGTGCAATGGGGTTAGGTGCTGGAGCACTAGCTGCTGGTGCTGTAATATTTGGTGATGACTTCATGTCAGGATTTGATGTTCCTCCTGACCTAGGAGATCCTAGTTTCAACCTAGAAATGGATCCTCCTTTCTCAACATACATTGATTAG 1827 0.4647 MGVAAQTQLQLEKRVLEGFSSKSMELKWVSRRISKSSQLEKTKKPLRPLFPIYISTDPLHVDPHRLRDLFADCNYSTQRFPTRPGPEPVDIHKLRIALSHSAVVVSVFCNLRHVNAVVPYDDNSSSLVADFFTPVSPSRDQLVGFGRAVSDYGLTASIYDVVVSPSLQRMGIGQMIVKKIARVLTNRDIYDIAALCSENERLFFKACGFGDDILNSTTMMYRRTVPLITQEGGLQETTSLLFIPGLSMGITWVEVCLISAHGLQHSTSLWKRQWFAVGWIDLNSKYCTKVVDSGSANPVWRTKFAIPVEDSAPNLLDLALNVDVYSTDPIFFMEKLHGSATVFLREFLVKQVKNSEVSNSKQQGVGRYQLRKKKSSKPRGFIDILICISNEKKEPNPHSGNKDEILLLDNGGSTQFNMEGGVRQAYRRKPQASIHQPEDHVQTNVPDYHSVPFTTTNYYNPYLGEASYHEMGEASYHEMGEPSYHEMGEPSYHEVGEASYHEAAGPSYLLPRTITPPPPAPPSNVGYIPTFLPIKNGLSPSYTDMSTTRAAPGQRVSARGAMGLGAGALAAGAVIFGDDFMSGFDVPPDLGDPSFNLEMDPPFSTYID 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01560 608 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 53 220 IPR039143 GO:0004343|GO:0006048
Phco7g01560 608 Gene3D - 50 213 - -
Phco7g01560 608 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 138 209 IPR016181 -
Phco7g01560 608 Gene3D C2 domain 251 387 IPR035892 -
Phco7g01560 608 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 89 231 IPR000182 GO:0016747
Phco7g01560 608 ProSiteProfiles C2 domain profile. 230 357 IPR000008 -
Phco7g01560 608 Pfam C2 domain 254 352 IPR000008 -
Phco7g01560 608 Pfam Acetyltransferase (GNAT) family 139 209 IPR000182 GO:0016747
Phco7g01560 608 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 247 389 IPR035892 -
Phco7g01560 608 CDD NAT_SF 140 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01560 Phco-Chr7 14842629 14846348 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Phco7g01560 C2 2.2e-05 CL0154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01146 3 9912460 9913888 Phco7g01560 7 14842629 14846348 PCT