Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01493 ATGGGAAATAATCAGTTCTCGGGAAGAATTCCCACAAGCATTGGACAATGTAAGCGGTTATTTTCTCTTGACTTGAGAATGAATAGGCTTAGAGGGACCATACCAAAGGAGATCTTTCAGCTTTCTTATTTAACATCCTTGTATTTAGCAGGAAATTCCTTGCATGGTTCGCTTCCTCCTGAGGTCGGCACCATGACACAACTTGAGACCTTGGATTCATCATCAAACAATCTCGTTGGCCCTATTCCGGTAAGTTTAGAAAACCTCCATTATCTACAGAAATTAAATTTGTCTTTCAACCATTTGGAAGGGGAGGTTGAAAGCTTAAGCGCTGGTGATACCGCCACCCTTGCTGTCAAAGTCCCGGACCTGCAACAAAGCAAAGCGTCTAAGAGTTTCAGTGCGGAATGTGAAGCTTTGAAAAATGTTAGGCATCAGAACCTGGTGAAGGTTATCACTTCTTGCTCCAGCCTTGATTATAATGGGGAGGAATTTAAGGCCCTTGTCGTGCAATTCATCATTGCCATTGATGTTGCTTATGCTGTGGAGTACTTGCACCATTACTGCCATCCACCAATAGCTCATTGTGATCTGAAACCTGCCAATGTTCTTCTAGATGAAAACATGACTGCACATGTTGTAGATTTTGGATTGGCAAGGTTTCTGTCACAAAGCACATCAGAGAAGCAGAGTAGCACTCTAGGACTGAAAGGATCAATTGGCTACATTGCCCCAGAATATGGTTTTGGAAGCAAGGCTTCAACTGAGGGCGATGTGTACAGTTTTGGGATCCTAGTGCTAGAGATGTTCACAGGAAAAAGACCAACTGATGAAATGTTCAAGGAAGGATTAAGCCTCAGGAAATTTGTCTCAGGTATGGATGAGAATGAAGTAGTGAAGATGGGTGGTGATAGAAGGCTGATTGAGGATTATGGATATTCAACACAAAGCTCAAACAGTGATGATCATAGCAGTGGCTTTGGCAGCAACACACATTGGATGCGTAAAGCTGAGGAGTGCATGGCTGATGTGATAAGAGTTGGTCTGAGTTGCACAGCTGATCAACCCAAAGAACGATGGAACATCAGAGAGGCCTTATCAAAATTGCAAGCTATTAACCACTCTATGCTTCCTTTTTGA 1140 0.4289 MGNNQFSGRIPTSIGQCKRLFSLDLRMNRLRGTIPKEIFQLSYLTSLYLAGNSLHGSLPPEVGTMTQLETLDSSSNNLVGPIPVSLENLHYLQKLNLSFNHLEGEVESLSAGDTATLAVKVPDLQQSKASKSFSAECEALKNVRHQNLVKVITSCSSLDYNGEEFKALVVQFIIAIDVAYAVEYLHHYCHPPIAHCDLKPANVLLDENMTAHVVDFGLARFLSQSTSEKQSSTLGLKGSIGYIAPEYGFGSKASTEGDVYSFGILVLEMFTGKRPTDEMFKEGLSLRKFVSGMDENEVVKMGGDRRLIEDYGYSTQSSNSDDHSSGFGSNTHWMRKAEECMADVIRVGLSCTADQPKERWNIREALSKLQAINHSMLPF 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01493 379 Gene3D Transferase(Phosphotransferase) domain 1 165 377 - -
Phco7g01493 379 Gene3D Phosphorylase Kinase; domain 1 116 162 - -
Phco7g01493 379 Pfam Protein kinase domain 111 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01493 379 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 11 106 - -
Phco7g01493 379 SUPERFAMILY Protein kinase-like (PK-like) 113 371 IPR011009 -
Phco7g01493 379 SUPERFAMILY L domain-like 3 105 - -
Phco7g01493 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Phco7g01493 379 Gene3D Ribonuclease Inhibitor 1 115 IPR032675 -
Phco7g01493 379 ProSiteProfiles Protein kinase domain profile. 1 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01493 379 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 143 378 - -
Phco7g01493 379 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 3 106 - -
Phco7g01493 379 SMART serkin_6 99 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01493 Phco-Chr7 14057722 14059443 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Phco7g01493 Pkinase 6.7e-25 CL0016