Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01455 ATGGACACAGCTCAGTGGGCACAGGGTATTGGAGTGGTTAAACCTATGGAAGGTTCAAAGCCTCCTCCTATGTTGGAGAGAAGGGCGAGGCCTCAGAAGGATCAAGCTTTGAACTGCCCAAGGTGCAATTCCACCAACACCAAATTCTGCTACTACAATAACTATAGCCTCTCCCAGCCAAGGTACTTTTGCAAGACATGTAGAAGGTATTGGACTGAGGGTGGTTCTTTGAGAAATGTTCCTGTGGGTGGTGGCTCTAGAAAGAACAAGAGATCAACTCCATCAGTTCCATCACCAGCATCGGCACCAACAAAGAAGCTTCCTGATCTCACAACACCAAATTTCCCTCAATCTGCTTCTCAGGACCCTAAGATCCACCAAGGCCAAGACCTTAACTTAGCATATCCGCCAGCTGAGGACTATAACACTGTGTCCAAGTTCATCGAGGTTCCTTACAGCACGGAATTAGACAAGGGTAGTCTTCAAAACGCCACTTCCTCATCAGCACCGTCTCAGTTGTCTGCCATGGAGCTTCTCAAGACTGGGATTGCTTCCTCAAGGGGTTTAAACTCCTTCATGCCAATGTACAATTCAACTGGGTTTCCTTTGCCAGACTTTAAGCCACCACCTGGCCTTAACTTCAGTCTAGAGGGGTTTGAAAATGGTTACGGGGGTCTTCAGGGAATTCAAGAGGGTCCTACAGGTGCAAGGATCTTATTTCCTGTGGAGGATTTAAAGCAGCAGGTTCCAACCACCAATGAGTTCGATCAGCAGAATAGAAGTCAAGGGGATTCAACTGGGTATTGGAATGGCATGTTAGGTGGCGGATCGTGGATCTTCGCGCACGGTTTGCTGCTACCACAGCAACACATCAAGGAAAAGGATTCCCATCAATACTATTGTCAGTTCCCTTCAGTGGTTGATGAAGTGGAGGGTCCTACAAACATTCCTCTTGGTAACCGTGCAGGAATATTATCCTCCACTGCGAGTGTCCTCCTCCACGTATAG 1008 0.4772 MDTAQWAQGIGVVKPMEGSKPPPMLERRARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSTPSVPSPASAPTKKLPDLTTPNFPQSASQDPKIHQGQDLNLAYPPAEDYNTVSKFIEVPYSTELDKGSLQNATSSSAPSQLSAMELLKTGIASSRGLNSFMPMYNSTGFPLPDFKPPPGLNFSLEGFENGYGGLQGIQEGPTGARILFPVEDLKQQVPTTNEFDQQNRSQGDSTGYWNGMLGGGSWIFAHGLLLPQQHIKEKDSHQYYCQFPSVVDEVEGPTNIPLGNRAGILSSTASVLLHV 335
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01455 335 ProSitePatterns Zinc finger Dof-type signature. 39 75 IPR003851 GO:0003677|GO:0006355
Phco7g01455 335 MobiDBLite consensus disorder prediction 86 125 - -
Phco7g01455 335 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677|GO:0006355
Phco7g01455 335 MobiDBLite consensus disorder prediction 1 32 - -
Phco7g01455 335 Pfam Dof domain, zinc finger 34 91 IPR003851 GO:0003677|GO:0006355
Phco7g01455 335 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 26 168 IPR045174 GO:0003700|GO:0006355
Phco7g01455 335 MobiDBLite consensus disorder prediction 78 125 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco7g01455 Phco-Chr7 13545696 13548406 Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phco7g01455 zf-Dof 1.5e-33 No_clan