Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01389 ATGGGTCAGCAATTGGACCTCTCATCTTACCCTTTCAACTGGCCATCTTTGGCATGTGCCACTTTGCCTCTGACATCAAATTTTCTTCTCAGAACCAATCATCTTTCATCATCTGCAACATCACGGGGTTCATCTTGCTTTTGTGCCCACATGGACAACATGGGAGACCCAAAGAGCATCATGAAAGAGCTACTACAAGGTTTGGAGTTGGCAAGGCAGCTCCAAGTGTATCTCCACACACCTTCTTCGTCCCAAGAAACCCGTGACCTCATCCAGAAGATCATATCCACCTTTGAAAAGGCACTTGAAATGGTAAATTGGAAAGGGCCAGTGCCTGCGGGTGAGTCATCGCAACTGCCCATAACAGCTGCAATCCGAATGTCAGACTCACCTATCAGCAGTAGTCCCCAAAGTGAAGACTCCGAGAGAGATTTGAAGGACCAAGACCACAATGCTTTCAGAAAAAGAAACACTTTGCCGAGATGGACAAAAAGGATTCGGGTTACACCAGGGATGGGGGTGGAAGGGCCTCTTGATGATGGATATAGTTGGAGAAAATATGGTCAGAAAGACATTCTTGGAGCCATGTACCCCAGGGGCTATTACAGATGTACCCACAGAACTGTTCAAGGTTGCATGGCAACAAAGCAAGTGCAAAGATCTGATGAAGACTCTACAATATTTGAAATCAATTACCGAGGAAAGCACACATGCACGGTGGCCCACAACGTGGGTTCTTCTTCAATAATTCCACTGGAAAACCAAGAACCAAGTCTGAACAACACAAACCAGCAGCAGAATATCTTGCAAACCCTTGAGCAGCAACCAAATGATTTACTTTCCAATCTCCGAGAAGGGTTGAGAGTCCAAACAGAGAACCTAGATTCCACTGACCAATCATTTGCTCCATTCCTTTTCCCTTTATCGACAAACATAAAAAATGAAGGTCAAGTTTTCCCTCCCCATTTGCTTGAAAATTTCAGTTCTCCCTATATGTCACCTGCTACATCCGGAATAAGCCACTATTCGGTGTCTCCAAGTAGGGTGAACAGTGTTGTAGGGAACCCAAATTTGGCAACTTTTGAGTCTCATATCAATGACATGATCCCAGCTGCTACTTCAGCTCCAAATTCAGAAGCAGTTGGTTTAGAGTTTCATTTCAACCAGTTTGAATTTGACGGTCAGAACTTCAGATTCGATAACCCATGA 1209 0.4458 MGQQLDLSSYPFNWPSLACATLPLTSNFLLRTNHLSSSATSRGSSCFCAHMDNMGDPKSIMKELLQGLELARQLQVYLHTPSSSQETRDLIQKIISTFEKALEMVNWKGPVPAGESSQLPITAAIRMSDSPISSSPQSEDSERDLKDQDHNAFRKRNTLPRWTKRIRVTPGMGVEGPLDDGYSWRKYGQKDILGAMYPRGYYRCTHRTVQGCMATKQVQRSDEDSTIFEINYRGKHTCTVAHNVGSSSIIPLENQEPSLNNTNQQQNILQTLEQQPNDLLSNLREGLRVQTENLDSTDQSFAPFLFPLSTNIKNEGQVFPPHLLENFSSPYMSPATSGISHYSVSPSRVNSVVGNPNLATFESHINDMIPAATSAPNSEAVGLEFHFNQFEFDGQNFRFDNP 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01389 402 MobiDBLite consensus disorder prediction 129 156 - -
Phco7g01389 402 ProSiteProfiles WRKY domain profile. 173 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g01389 402 Pfam WRKY DNA -binding domain 179 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g01389 402 MobiDBLite consensus disorder prediction 139 156 - -
Phco7g01389 402 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 48 329 IPR044810 GO:0003700
Phco7g01389 402 SUPERFAMILY WRKY DNA-binding domain 177 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco7g01389 402 FunFam WRKY transcription factor 53 164 241 - -
Phco7g01389 402 Gene3D WRKY domain 172 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco7g01389 402 SMART WRKY_cls 178 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01389 Phco-Chr7 12674446 12676285 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco7g01389 WRKY 1.9e-25 CL0274