Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01330 ATGGATAGCCCTCCTATTCCATCTTACGTCGTGGTTGCATGTGATGCCACAAGGGACCGCACTGAACACGAGATCAAACTCGTTGTTGATCATGTTCGGTCCAGTGGTGTCTTTCTCTCAAATGGTGACAAGCTGCTCGTGCTTTATGTATTGCACAAAGTCTCTCACCCTATGGGGTACCAGACGTTAGCATGTCCCGAGTCTTTTGCTGGAACCAACTTTCGTACAATGGAGGAAGAAGTCAAAAAAAAAGTTGATACATATGCTCGTGAGCTTTTATCAAGTTATGAAGATCTTCAAAGTGAAGGGGCTACTATTGAAGTTAAAGTCACCGCAGGATTTCCAATTAAACAGGTTGTTTTACAGGAGATTACAAACTATAATGCATCTTGGATAATACTTGACAGACATCTTCGGCGCGACCTGAGATTCCACCTTAACAAGTTGCCATGTAAGGTTGCATTGCTTAAAGATGACTTGTCTCTGGAGATTTGGAAATCTCATTATACACAAGACACAAGGGTTACAGCAACAAAATTTGTATTTTCTTTATCAAAGTTTGTGTCGCTATCAGATTGTCATAGCATTGAAGACATTGAGCACTCTATTGTGTCTTACAAAAGCTATCCCCATTCTATAGTTTCTTCTGATATCAGTGGTACCATTAGGAGCTATACGAAGCAGTCAAGTGGTAACAGGTCGCGCGATTACAATTTTGTATCAGAATTTGGATCCTCTTCTAAGCAAGAAAGATCAGGCATAAGCACGAAAGGAGAATATAGGTATCTCACTAGTTCTCAGATTGACCAAAAGCAAAACCAAAGTGGCTTTCTGCCAAAACATTCAGATGCACCGCTTCTTTGTACTGGCTGTGGGACAAGAACAGAGTTATCTATCAAAGAGTCAATGAAGTTTAGCTACTCTGACGTACAAGTGGCAACAAATGATTTTTCAAAGGATAACTTATTAGGTGAAGGTGGCTATGGTCACGTATACAAGGGCGTGCTTAAAGATGGACAGCAAATTGCGGCAAAGGTAAGGAAAGAAGAAAGTTCACAAGGATTTTCTGAATTTCATTCTGAGGTGTACGTCTTAAGTTTTGCTCGACACAAGAATATAGTGATGCTGTTGGGTTATTGTTGCAAAGAAAAGAAAAACATCCTCATTTATGAATATATTTGCAACAAGTCTCTCCATTGGCATTTATTTGAAAATGATGCAGCAGTTCTTGAGTGGCACCAGAGGTATGCTATAGCCATTGGGATTGCAAAGGGATTGCGTTTTCTACATGAGGAATGCCGTGGAGGTCCTATTATTCATCGGGACATGCGACCAAGCAATATACTTCTCACCCACGATATTGTTCCCATGCTAGGTGACTTTGGGCTTGCTAAATGGAAGACTGGTAATGAAAGTCCTCAAACAATGATAATGGGAACATTAGGATACCTTGCTCCTGAGTATGCTGAAGACGGTATTGTTTCTGAGGGAACAGATGTGTATTCTTATGGCATTATCCTGTTACAATTGATATCGGGACGCCAGGTTGGGAATTCCAACAATCCAGAACAACAACAATCTCTCCGACAATGGGCTGAGCCAATGATAGAGAAGTTGGCCTTACATGAACTGATTGACACTCGTCTAGGGGAATCATATGACACGTATGAACTCTACCTCATTGCTAAAGCAGCATACTTCTGTGTGCAAAGGAAGCCTGAGATGCGTCCATCAATGGGAGAGGTTGTGCGACTTCTTGAGGGAGAAAGTAGCCACTTCCACTCCTTGGAAGAACAATTTGTACCTAATTTTAACGGCTAA 1821 0.413 MDSPPIPSYVVVACDATRDRTEHEIKLVVDHVRSSGVFLSNGDKLLVLYVLHKVSHPMGYQTLACPESFAGTNFRTMEEEVKKKVDTYARELLSSYEDLQSEGATIEVKVTAGFPIKQVVLQEITNYNASWIILDRHLRRDLRFHLNKLPCKVALLKDDLSLEIWKSHYTQDTRVTATKFVFSLSKFVSLSDCHSIEDIEHSIVSYKSYPHSIVSSDISGTIRSYTKQSSGNRSRDYNFVSEFGSSSKQERSGISTKGEYRYLTSSQIDQKQNQSGFLPKHSDAPLLCTGCGTRTELSIKESMKFSYSDVQVATNDFSKDNLLGEGGYGHVYKGVLKDGQQIAAKVRKEESSQGFSEFHSEVYVLSFARHKNIVMLLGYCCKEKKNILIYEYICNKSLHWHLFENDAAVLEWHQRYAIAIGIAKGLRFLHEECRGGPIIHRDMRPSNILLTHDIVPMLGDFGLAKWKTGNESPQTMIMGTLGYLAPEYAEDGIVSEGTDVYSYGIILLQLISGRQVGNSNNPEQQQSLRQWAEPMIEKLALHELIDTRLGESYDTYELYLIAKAAYFCVQRKPEMRPSMGEVVRLLEGESSHFHSLEEQFVPNFNG 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01330 606 ProSiteProfiles Protein kinase domain profile. 317 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01330 606 Pfam Protein kinase domain 318 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01330 606 CDD STKc_IRAK 323 588 - -
Phco7g01330 606 Gene3D HUPs 10 157 IPR014729 -
Phco7g01330 606 ProSitePatterns Tyrosine protein kinases specific active-site signature. 438 450 IPR008266 GO:0004672|GO:0006468
Phco7g01330 606 Gene3D Phosphorylase Kinase; domain 1 290 392 - -
Phco7g01330 606 Gene3D Transferase(Phosphotransferase) domain 1 394 600 - -
Phco7g01330 606 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 393 598 - -
Phco7g01330 606 SUPERFAMILY Protein kinase-like (PK-like) 299 587 IPR011009 -
Phco7g01330 606 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 289 392 - -
Phco7g01330 606 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 275 592 - -
Phco7g01330 606 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01330 Phco-Chr7 11973519 11977411 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Phco7g01330 Pkinase 2.7e-41 CL0016