Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01319 ATGCGTGTCCGTTTAAAGCAGCTGCTACTTGTTGTGCTCCTGGCTGCAGCAGCAGCAGCAGCAGCAGCAGCTAAAACCCAACCTATGTCTAAGACAAACTGCAAAACAGAGTGTGGCAACGTCACCATTCCCGTTCCCTTTGGCCTCACAGAGCCCTGTTCTCTCAACACCTCATTTCTCATCACTTGCAACCAATCCATTCCATTCTTGAAAACTATGGAACAAAAGGTGCGTGTGCTTAGCATCTCACTCGACGGCCAACTGGAAGTTTCATTGAAAGTTGCCACAAGTTGCGTCAATAACAACAAGACAAGTGAATCAGAGAGCAACTTCTGGTTCTACCGGTTCGACACACCTTTTCACCTACCATCCAAGCAAAACATGTTAACTGTATTGGGCGCTAACACTGCAGGAGTAGTACAACCTTTAGATTCAGGATACCGGTCTCTGTGCGTGTCTGTGTACAGTGGTAGGATGGAGAAGGAGCCACCACATGACGAGTCATGCTCCGGCAGTTTTTGTTGCGAGACTCCAATTCTACAAAGGCTATCGGAATTCTATATTTATTCTATAAATATCTCCATAGATGACATGAAGAACACATTTGAGTCCTACCCATGTGGTTATGCATTTCTGGTTAAGGAGGGAGGCTACAATTTCTCCATGGAAAACCTGCGCAATTTTAAGAGCAGCAACACGTTTCCTGTGGTTATGGATTGGGCAGTGGGGAACACGTGTGCTAAGAAGAATGCTTCAAGTTATGCGTGTAAGTCAAACCACAGTGAATGTTACAATGCAGAGGTGGGACCTGGTTACCGTTGTAAATGCTCCAGTGGTTTTCGGGGAAACGCATACCTACCTGATGGTTGTGTAGATGTTGATGAATGCGCTGAAGAATTGCACGACTGTTTAAAGGGGAGATCATCATGCAGCAACAGTCCAACAGGGAGCTACAGTTGTTCTTGTCCAAAGGGATATGAAGGAGATGGGAAAAAAAATGGAACCGGATGTCTTCGCAGGAGTTACAGCAAAATCATAATTGCTTTCAGTGTGAGTGGAAGTATATTGGCGCTTGTGGGGGGAACCTTATACGTGTACTGTGAATTAAAGAAAAGAAAACTCAACAAACTTAAAGAACAATTTTTTCAACTAAATGGTGGCCTGTTATTACAACAGCAGATAGGCAGGTATAGTGGATCATCTGAAATGACAAAAATCTTTACTGTGGAAGAACTAAAAGAGGCCACCAACAATTTCAAAGAAGACATGGTCTTAGGGGAAGGGGGGCAGGGAACAGTTTACAAAGGAATATTATCTGATAATAGGATTGTAGCAATAAAAATGTCCAGAATTAGTAACCCAAACCAAATTGAGCATTTCATCAATGAGGTGATTCTGCTTAGTCAAATCAATCACAGAAATGTGGTGAAACTCTTGGGATGTTGTTTAGATACAGAAGTCCCCTTACTTGTTTATGAATTTGTTCCCAATGGAACTGTTTACGAGCATCTATACGATCAAAGCCAATCTTTAAGACTTACATGGAAAAGAAGATTACAAATAGCAACAGAAACTGCTGGGGCCCTGGCATACTTGCATTCTGCTACCAATGCACCAATCGTACATAGAGATGTGAAAACTTCAAACATACTACTTGATCACAACTTCACTGCAAAGGTTTCTGATTTTGGAGCTTCAAGGATTATTCCTGTTGATCGAACTGAGTTAACCACTTTGGTGTTGGGGACACTGGGTTATCTTGATCCAGAATACTTCCACTCAAGCCAGTTAACAGAGAAAAGTGATGTCTATAGTTTTGGAGTTGTCCTAGCCGAACTACTCACAGGAAAGAAGGCACTCTCTTTTGAAAGGCCAGATGCTCATAGAAACTTAGCGGTTCACTTCCATTCTTCAATGAATGAGGGTCAGTTACTTGACATTGTAGATAGCCGCATAATAGACGAGGCAAATGTTGAGCAACTAATGGATGTTGCCAATATTGCAAGCCACTGTTTGAGGTTGAAGGGGGAGGAAAGGCCCACCATGAGAGAAGTGGCAATAGAACTTGAAGGAATAAACATTGTGGAGAAGCACCAATGGGAAAAAGTCAACTTGTTGTCAGAGGAGACTGAAAATCTTCTCAAAGCAACACCATCATCTTATTTTGGCATAGATGGTGTTAACAGAAGAAGCATTCATTCTGGCTCTGATATTTCAAACCGAATTTCCTTGTCCTTAACTAGTGGAAGATGA 2253 0.423 MRVRLKQLLLVVLLAAAAAAAAAAKTQPMSKTNCKTECGNVTIPVPFGLTEPCSLNTSFLITCNQSIPFLKTMEQKVRVLSISLDGQLEVSLKVATSCVNNNKTSESESNFWFYRFDTPFHLPSKQNMLTVLGANTAGVVQPLDSGYRSLCVSVYSGRMEKEPPHDESCSGSFCCETPILQRLSEFYIYSINISIDDMKNTFESYPCGYAFLVKEGGYNFSMENLRNFKSSNTFPVVMDWAVGNTCAKKNASSYACKSNHSECYNAEVGPGYRCKCSSGFRGNAYLPDGCVDVDECAEELHDCLKGRSSCSNSPTGSYSCSCPKGYEGDGKKNGTGCLRRSYSKIIIAFSVSGSILALVGGTLYVYCELKKRKLNKLKEQFFQLNGGLLLQQQIGRYSGSSEMTKIFTVEELKEATNNFKEDMVLGEGGQGTVYKGILSDNRIVAIKMSRISNPNQIEHFINEVILLSQINHRNVVKLLGCCLDTEVPLLVYEFVPNGTVYEHLYDQSQSLRLTWKRRLQIATETAGALAYLHSATNAPIVHRDVKTSNILLDHNFTAKVSDFGASRIIPVDRTELTTLVLGTLGYLDPEYFHSSQLTEKSDVYSFGVVLAELLTGKKALSFERPDAHRNLAVHFHSSMNEGQLLDIVDSRIIDEANVEQLMDVANIASHCLRLKGEERPTMREVAIELEGINIVEKHQWEKVNLLSEETENLLKATPSSYFGIDGVNRRSIHSGSDISNRISLSLTSGR 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01319 750 FunFam Wall-associated receptor kinase 2 389 494 - -
Phco7g01319 750 Pfam Protein kinase domain 420 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01319 750 FunFam Fibrillin 2 287 333 - -
Phco7g01319 750 ProSitePatterns Serine/Threonine protein kinases active-site signature. 540 552 IPR008271 GO:0004672|GO:0006468
Phco7g01319 750 Gene3D Laminin 243 294 - -
Phco7g01319 750 SUPERFAMILY Protein kinase-like (PK-like) 402 692 IPR011009 -
Phco7g01319 750 FunFam Wall-associated receptor kinase 2 495 712 - -
Phco7g01319 750 Gene3D Transferase(Phosphotransferase) domain 1 495 713 - -
Phco7g01319 750 SMART egf_5 295 338 IPR000742 -
Phco7g01319 750 SMART egf_5 245 291 IPR000742 -
Phco7g01319 750 SMART serkin_6 419 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01319 750 Pfam Wall-associated receptor kinase galacturonan-binding 34 90 IPR025287 GO:0030247
Phco7g01319 750 Gene3D Laminin 295 337 - -
Phco7g01319 750 CDD STKc_IRAK 425 692 - -
Phco7g01319 750 ProSiteProfiles EGF-like domain profile. 292 329 IPR000742 -
Phco7g01319 750 Gene3D Phosphorylase Kinase; domain 1 395 494 - -
Phco7g01319 750 SUPERFAMILY EGF/Laminin 290 337 - -
Phco7g01319 750 ProSiteProfiles Protein kinase domain profile. 419 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01319 750 CDD EGF_CA 292 329 - -
Phco7g01319 750 SMART egfca_6 292 338 IPR001881 GO:0005509
Phco7g01319 750 Pfam Calcium-binding EGF domain 292 337 IPR001881 GO:0005509
Phco7g01319 750 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 695 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01319 Phco-Chr7 11894511 11897469 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Phco7g01319 Pkinase 1.9e-46 CL0016