Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01317 ATGTCTGTGCACTCTAAGCAGCTGCTACTGCAGCTGCTTCTTGTTGCCCTCCTTATTGCAAAAACTAAAACTCAAGACATACCAAACCCAAACTGTTCATCAAAGTGTGGCAATGTCACCATTCCCTTCCCCTTCGGCATGTCCGACACTTGTTCCTTAGACACCTCATTTCTCCTCACTTGCAACCAAACGTCTCCTTCATCACACACCCTTTTCCTGCCACAAACCAATATAACTGTGCTTAACATCTCACTCGACGGCCACATGCAAATTTCATGGCCTGTAGCCAGCGACTGCTACGCCGACAGAGGCAAACTCGTGAGGGAATCATTTCAAGACCTAAACCTCACAACTTTTCAAGTCTCTTCCAACAGAAACAGGTTGACTGTAATTGGGTGTGACACGCTTGGAATAGTGGTGGGAAGCGATTTGGAGGGGAAGAACTACACGACGGGATGCATTTCCTTGTGCAACAGGCTCCAAGACATCCAAACAAACGGGACTTGTTCCGGCACAGGTTGTTGCGAGACTTCGATCCCCCGCGGGTTGTCGAGTTTCTCCTACGGTTCTGGGAGTTTGTTCAACCACACGGACGTAATGGACTTCAACCCGTGCGGGTATGCGTTCCTGGTGGAAGATGGGGCCTACAATTTCTCCTCCACGGACCTCGTCAAGTTCGACAAAACCACGTTCCCCGTGGTGGTGGATTGGGCGGTTAAGAACCAAACGTGCGAAGAAGCTAAGAAAGAGGCTTCCAGTTACGCGTGTAAGGCAGAGCACAGTGATTGTTTCCATTCAGTTGAGGGATCTGGTTACCTTTGCAGCTGTTCAAATGGTTTCGAGGGAAACCCTTATCCTCTTCATGGTTGTCAAGATGTTAATGAATGCATGGGATCCAACGATTGCGTTGATGGGGCCAAATGCAGTAACTCTCCTGGTGGTTATAACTGTTTATGCCCAAAAGGATTTGAAGGAGATGGACAAAAACATGGAACAAGATGCACTCACAAATCTAGCATCAACTCAAGGAAAGAAATCATACTCATAATTGCTTTGAGTGTGAGTGTAAGCCTAGTGGCACTACTTGTGGGAAGCTTTTATGTGCATTGGGCATCAGAGAAAAGAAAGATCATCGAACTTAAAGAACAATTTTTTCAACAAAATGGTGGTCTTTTCTTACAACAACACATAATCAAGCATAAAGGCTCAATTGAAACGGCTAAAGTCTTCACTGTAGAGGAGCTAAAAGATGCCACCGACAACTTTGATGAAGGCAAGATCCTTGGCCAAGGTGGCCAAGGAACAGTTTACAGAGGAGTATTGCTGGACAATAGAACTGTGGCAATTAAGAAGTCTAAAATCAGTGATCCAAATCAGATTGAGCAATTCATTAATGAGGTGATTGTGCTTTCCCAAATCAATCATAGGAATGTGGTAAAACTCTTGGGTTGTTGTTTGGAGACAGAAGTTCCTATGCTTGTTTATGAATTCATTCCCAATGGTACTATTTATGAGCACCTTCATGATCATAATTGTTCTCTAAAACTTACATGGAAAACAAGGTTGAGAATAGCAACAGAAACAGCTGGGGCCATGGCTTATCTGCACTCTGCTACTTCTACACCAATCATACACAGAGATGTGAAAACTACAAATATTCTTCTTGATCATAACCTCATTGCAAAGGTTTCTGATTTTGGAGCATCAAGGATTTTCCCCCTTGATCAATCTCAACTAACCACTCTGGTGCAGGGAACATTAGGGTATCTTGATCCAGAATACTTTCATACAAGCCAATTGACAGAGAAGAGTGATGTCTATAGTTTTGGGGTTGTCCTTGCAGAGCTACTAACAGGGAAGAAGGCACTTTCATTTGATAGGCCAGAGGCTAATAGAAACCTTGCAGTGTACTTTGTTTCTTCAATGAAAACAGGCCAATTACTTAACATTGTGGACAACCATATATTGCATTATGCAAATGTTGAGCAACTAACAGAAGTTGCCAATATTGCAAATCGATGTTTAAAGGTGAAAGGAGAGGAAAGACCCACCATGAAAGAAGTGGCAATGGAACTTGAGGGACTTCAAATTATGGGAAAGCACAAATGGGAAAGTGTTAGTTCATCTTCAGAAGAGACTGAAAACTTCCTAAACTCAGCACCATCCACTCTTAGTATTGAAAGTGGCATTAATTCAGGCTTTGATAGCTTAAACCAGATTTCTACGTCTTTTGGGGGTGGAAGATGA 2247 0.4317 MSVHSKQLLLQLLLVALLIAKTKTQDIPNPNCSSKCGNVTIPFPFGMSDTCSLDTSFLLTCNQTSPSSHTLFLPQTNITVLNISLDGHMQISWPVASDCYADRGKLVRESFQDLNLTTFQVSSNRNRLTVIGCDTLGIVVGSDLEGKNYTTGCISLCNRLQDIQTNGTCSGTGCCETSIPRGLSSFSYGSGSLFNHTDVMDFNPCGYAFLVEDGAYNFSSTDLVKFDKTTFPVVVDWAVKNQTCEEAKKEASSYACKAEHSDCFHSVEGSGYLCSCSNGFEGNPYPLHGCQDVNECMGSNDCVDGAKCSNSPGGYNCLCPKGFEGDGQKHGTRCTHKSSINSRKEIILIIALSVSVSLVALLVGSFYVHWASEKRKIIELKEQFFQQNGGLFLQQHIIKHKGSIETAKVFTVEELKDATDNFDEGKILGQGGQGTVYRGVLLDNRTVAIKKSKISDPNQIEQFINEVIVLSQINHRNVVKLLGCCLETEVPMLVYEFIPNGTIYEHLHDHNCSLKLTWKTRLRIATETAGAMAYLHSATSTPIIHRDVKTTNILLDHNLIAKVSDFGASRIFPLDQSQLTTLVQGTLGYLDPEYFHTSQLTEKSDVYSFGVVLAELLTGKKALSFDRPEANRNLAVYFVSSMKTGQLLNIVDNHILHYANVEQLTEVANIANRCLKVKGEERPTMKEVAMELEGLQIMGKHKWESVSSSSEETENFLNSAPSTLSIESGINSGFDSLNQISTSFGGGR 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01317 748 FunFam Wall-associated receptor kinase 2 392 497 - -
Phco7g01317 748 FunFam Wall-associated receptor kinase 2 498 715 - -
Phco7g01317 748 ProSiteProfiles Protein kinase domain profile. 422 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01317 748 SMART serkin_6 422 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01317 748 SUPERFAMILY Protein kinase-like (PK-like) 405 693 IPR011009 -
Phco7g01317 748 Pfam Calcium-binding EGF domain 292 334 IPR001881 GO:0005509
Phco7g01317 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Phco7g01317 748 SMART egfca_6 292 335 IPR001881 GO:0005509
Phco7g01317 748 SMART egf_5 295 335 IPR000742 -
Phco7g01317 748 SMART egf_5 255 291 IPR000742 -
Phco7g01317 748 Gene3D Plasmodium vivax P25 domain 195 341 - -
Phco7g01317 748 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 308 319 IPR000152 -
Phco7g01317 748 SUPERFAMILY EGF/Laminin 291 329 - -
Phco7g01317 748 CDD STKc_IRAK 428 695 - -
Phco7g01317 748 Coils Coil 748 748 - -
Phco7g01317 748 Pfam Wall-associated receptor kinase galacturonan-binding 32 88 IPR025287 GO:0030247
Phco7g01317 748 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 703 IPR045274 GO:0007166
Phco7g01317 748 Gene3D Phosphorylase Kinase; domain 1 394 497 - -
Phco7g01317 748 ProSitePatterns Calcium-binding EGF-like domain signature. 292 317 IPR018097 GO:0005509
Phco7g01317 748 Gene3D Transferase(Phosphotransferase) domain 1 498 717 - -
Phco7g01317 748 FunFam Fibrillin 2 287 331 - -
Phco7g01317 748 ProSiteProfiles EGF-like domain profile. 292 335 IPR000742 -
Phco7g01317 748 Pfam Protein tyrosine and serine/threonine kinase 425 692 IPR001245 GO:0004672|GO:0006468
Phco7g01317 748 CDD EGF_CA 292 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01317 Phco-Chr7 11880769 11883872 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Phco7g01317 PK_Tyr_Ser-Thr 2.5e-49 CL0016