Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01308 ATGGCATATTTGGAGGAAATCCGAGAGAAACAAAGAGCTCGTGGCCCAGCCACCATTCTGGCCATTGGCAGTGCAACTCCATCCAACTGCATTTACCAATCTGACTTCACCGATTACTACTTTCGAGTCACCAAGAGTGATCACATGACTCAACTCAAAGCCAAGTTAAAGCGCATATGTGAGAAGTCGATGATTGAGAAACGCTACATACATCTCACTGAAAAAATGCTGAAAGAAAACCCCAACATAAGTGCTTATGAAGAACCATCCTTGGATGTACGCCAAGACATATTAGTTGAGGAGATTCCTAAGCTTGGTGAGAAGGCAGCATCGAAAGCCTTAAAGGAATGGGGCAAACCAAGATCAGATATTACTCATCTCATATTTTGCTCCACCTCGGGTGTAGACATGCCTGGTGCTGATTACCAACTTCTGAGGCTCTTGGGTCTTAAACCATCCACCAAAAGGTTCATGTTATACCATCAAGGTTGTTATGCTGGTGGCACCGTTCTTCGTCTTGCTAAAGACCTTGCTGAGAATAATGTTGGAGCACGTATTCTCGTGGTGTGTTCTGAGATCACAGTTGTCACCTTTCGTGGACCCTGTGAAACACACTTGGACTCGTTGGTGGGACAAGCCCTCTTTGGAGATGGAGCTTCATCCGTGATCGTTGGATCTGATCCTGACACATCCATGGAACGACCACTGTTTCACCTAGTGTCAGCATCGGAGACAATTCTACCCAACTCTGAGGGGGCAATTGAAGGACACTTGCGTGAGGTGGGGCTAACCTTCCATCTTAAGGATAACGTTCCTCAGTTGATTGGAGAGAACATAGAGAAAAGCCTCGAAGAAGCCTTCCACCCACTTGGGATCAGTGACTGGAACTCGTTGTTTTGGGTTGCCCACCCTGGTGGCCCTGCAATCTTGAAGCAGATAGAAGCAACGCTTGGGTTGAACCCTGATAAATTGAGAGCAACTAAACAAGTTCTGAAAGAGTATGGGAACATGTCTAGTGCATGTGTGCTGTTCATACTGGATGAGATGAGAAGTTGGTCCTTGGAGAAAGGGAAATCCAGTACTGGTGAAGGACCAAAGTGGGGTGTTTTATATGGGTTTGGCCCTGGCTTGACCATGGAGACCATTGTTTTGCATAGCGCCGCCGTAGACCCAAACAACTAG 1182 0.467 MAYLEEIREKQRARGPATILAIGSATPSNCIYQSDFTDYYFRVTKSDHMTQLKAKLKRICEKSMIEKRYIHLTEKMLKENPNISAYEEPSLDVRQDILVEEIPKLGEKAASKALKEWGKPRSDITHLIFCSTSGVDMPGADYQLLRLLGLKPSTKRFMLYHQGCYAGGTVLRLAKDLAENNVGARILVVCSEITVVTFRGPCETHLDSLVGQALFGDGASSVIVGSDPDTSMERPLFHLVSASETILPNSEGAIEGHLREVGLTFHLKDNVPQLIGENIEKSLEEAFHPLGISDWNSLFWVAHPGGPAILKQIEATLGLNPDKLRATKQVLKEYGNMSSACVLFILDEMRSWSLEKGKSSTGEGPKWGVLYGFGPGLTMETIVLHSAAVDPNN 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01308 393 Pfam Chalcone and stilbene synthases, N-terminal domain 5 228 IPR001099 -
Phco7g01308 393 SUPERFAMILY Thiolase-like 1 232 IPR016039 GO:0016746
Phco7g01308 393 FunFam Chalcone synthase 1 236 388 - -
Phco7g01308 393 ProSitePatterns Chalcone and stilbene synthases active site. 156 172 IPR018088 GO:0009058|GO:0016746
Phco7g01308 393 CDD CHS_like 16 384 - -
Phco7g01308 393 FunFam Chalcone synthase 2 1 235 - -
Phco7g01308 393 Gene3D - 236 390 IPR016039 GO:0016746
Phco7g01308 393 SUPERFAMILY Thiolase-like 235 385 IPR016039 GO:0016746
Phco7g01308 393 PIRSF PKS_III 2 389 IPR011141 GO:0009058|GO:0016747
Phco7g01308 393 Pfam Chalcone and stilbene synthases, C-terminal domain 239 386 IPR012328 -
Phco7g01308 393 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 5 387 IPR011141 GO:0009058|GO:0016747
Phco7g01308 393 Gene3D - 1 235 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01308 Phco-Chr7 11737419 11738746 Dispersed