Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01305 ATGCCTCCGCGGCGGTGCACGGCGTCTGCGGCGGCGGGGCAGACGGGGAGCAGCGACAGCGACTTGGATGAGTTCATCATGCGGTGCCACTCCTGCGAGGAGCAATACGACATGGACGACGCCGGAACCTGCAGGGAGTGCTACCAAGAGGCCAACGAGGCAGAGGAGGAGCTCCGCCTCGAGATCGACGACCTCAAGTCGAAGGTCTCCTTCCTCACACTCTCCTCTCCCACTCTTAATCCTTCTACCGCCGATATCGTCCTCGTTCCCGTCGACGACTCCGACGCCGCACCCATTCCCGCTCACAAGCACGTTCTGAGTAGTCGCTCTCCTGTTTTCAATGCAATGCTTGAGAATGATATGGAGGAAAGGCGGAGTGGCACCATCAAGATTTCTGATGTATCACATGATACCCTTTGTGCCTTTGTTAACTATTTATACACTGCCGAAGCGTCCCTTGATAACCAAATGGCCTGTAACCTGTTGGTTTTGGGAGAAAAGTATCAGGTGAAGCATCTCAAGACATATTGTGAGAAGTATTTGATCGCCAAAATGAATTGGAATAAGGCTATTGCAAACTATGCCTTTGCATATCAATACAATTGCAAACAATTACGAAGTGCATCCTTGGCAGTGATCTTGGACAAAATGGATTTGTTCACTCAAAATGAATATTATGCCGAGCTCGTGGACACCCATCCTCGTCTTGTTGTGGAAATATATGAAACATATATTAGCAAGCAATTAAATACTGCAGTGATTACTGATGGAGTTTCCTCATGGTTCCTTCTAAATGTTACTACTGTTGAAATGCCATATTTACTACTTTAG 831 0.4789 MPPRRCTASAAAGQTGSSDSDLDEFIMRCHSCEEQYDMDDAGTCRECYQEANEAEEELRLEIDDLKSKVSFLTLSSPTLNPSTADIVLVPVDDSDAAPIPAHKHVLSSRSPVFNAMLENDMEERRSGTIKISDVSHDTLCAFVNYLYTAEASLDNQMACNLLVLGEKYQVKHLKTYCEKYLIAKMNWNKAIANYAFAYQYNCKQLRSASLAVILDKMDLFTQNEYYAELVDTHPRLVVEIYETYISKQLNTAVITDGVSSWFLLNVTTVEMPYLLL 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01305 276 SMART BTB_4 84 185 IPR000210 GO:0005515
Phco7g01305 276 MobiDBLite consensus disorder prediction 1 20 - -
Phco7g01305 276 Gene3D - 187 256 - -
Phco7g01305 276 PANTHER SPECKLE-TYPE POZ PROTEIN 73 253 - -
Phco7g01305 276 CDD BTB_POZ_ZBTB_KLHL-like 84 168 - -
Phco7g01305 276 Pfam BTB/POZ domain 81 183 IPR000210 GO:0005515
Phco7g01305 276 Gene3D Potassium Channel Kv1.1; Chain A 52 186 IPR011333 -
Phco7g01305 276 SUPERFAMILY POZ domain 79 182 IPR011333 -
Phco7g01305 276 ProSiteProfiles BTB domain profile. 84 155 IPR000210 GO:0005515
Phco7g01305 276 Coils Coil 48 68 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Phco7g01305 BTB 3.1e-21 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01305 7 11707399 11711128 Phco7g01305 7 11707399 11711128 ECH