Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01299 ATGGGGTCGTGTGGGAGATCTGTTACCGCTAATGATCGCTCTGGAGGGTCTGTTATTGAGCAGCATTTGTGCTCAGAGGTTGCGGAGCAGGTTGTTTCTGTGCAGGAGTCTTGTTTGGAAGAGGCCTGCAATGTTGTGGACTCTAATGCTGACCTCTCCACTGTGACTGATGGTTGTGTGGGAGAGGACCTTGCGGGCTCTGCAAGGTGTCTTGGTGAGGGGTCTTGTGATGCTTTGGGTTTGGCAAGTGAATGTGAAAATGCTGATTTGTTGTCACTAGAGAAAACCACCGAAGATGATTGTCTGAATTGTTTGGGGGTTTCTTATGGGGGCATTGAAGTTCCCTGTGAAAGCAGTGTCTTCGAGGGGAATGTTCAGGGTGAGGGAAACTTTGATTTGCGGTCGCGGTCTTTGACCACTGATGATTCACAGAGGCTTTGTGCTCAACAATCACCTGCAACGGGAAATCAGTCCGTCGTTGTTGAAGGAGAAATCGATGACACAGGTCTTGGTGATGCTTTCAATCATGTTCTTGATTTCAGGGATTCTGAAATGTCTTTGGAATTAGAATCTGTGGCTGACTTGTTAGTTGATTGCAACCAGCAAAATGAGCAGCAGGAAATTATGAGAAATGCAGACCCCTTGTTGAATGTTGTGGAAAATTGTGATGCTTTAATTGGGAAAGAAGCTGATGCTTGCAGGCAGATTTCTCCTACCCTGGATATGGAAGTGCCATCTGGTGCGTTATGTGCAGATACAGAAGTAGAGAGCACAAGTGATCCGAAAGATGGTGAGGACCAGAATAGTACGTGCGAAGAAAAGGTTAAAGTTTTTAGTGACGAAGAAATCATTGTCATTAATTCATGTGTAAAAATATCATCCTCTCCAGGTTGCCATGGGACTGTTGAGAGCTCATCTGTAGATTCTCCTTGTGAGCCTGCCTTGTTGGATGCAGGGCGTGAAATGAAGAATGATGTACTACAAATAGAAGATGCTTTCTGTAAATTGAAGGACTGTTCCTCAGAGGAAACTAGCAACTCTACCTTTAGAAAGCCATCTTCTCCAGAATCAGGCCTGCCCTCTGTTGCTTCAATTGCCAACTGTTCTTCAAAGGATGTTTCTGATCTCCATTGTAAGGGTGATGATGTGGGCAACTCTACCTTTAGAAAGCCATCTTCACCAGAATCAGGCCTGCCCTCTGTTGCTTCAATTGCCAACTGCTCTTCAAAGGATGTTTCTGATTTCCATTGTAATGGTGATGATGTTTCTACTACCACTACTATTGCTACTAATAATGCTGTGGACGATCTGGGGCAGATGGATAATGATGGAAAAGAAGCAGTTGAAGTTGATTGTATCACTGAAAGCATTCCATTACTTTCTCAAAGGAATAGTCGAAGAAGTAAAGTAGGCCGTAAGACACAAACCAAAAAGGCTTCAAGAAGAGGCAAAAACAAAACCAAGGTGACACGTCCAAATGGGGATTATATGAAGTTATACTCAGAGGCTGCCAGAAAGAAAAGAAGTTGTTTCTCCAAACCAGCTCGTTCTTCTATCTGGGGTTCAATTGGGAATATTGAACAGTTTTTTGAGCAAGATAATGAGCGTGCAGTCAGTGAAGCTGTGTGCCAAGAATTGGGGAAGGCTAGAAGCAAGCGTCAAAGTGGGAAAGCAGTTAAGAATAATGCAAGTACTGGCTCATTGAGTTCAGTACAGAAGTGTCCTATTTCAACCTCTCGTGTTCGTCTGAAGATCAAATTTGGGAAAGAACCCGATTTAAGTTGCTCAAATGTCTTGACTCCAGACTCTGTTGATGGCTTGGCTTCTGCTTCCCTCTTGGAGTCTGGTTCAGCTTCTCAGAAAATAGCCTGCAATCTCGAAGATAAAATGTTGAAAGTGGTGACATTGGGCAATTCAGAATCTTTCAACAATGACATGGATAAAGATGATCTTGTTCGAAATGAACAAGTGGCTAATAGCCCCTTAGAAGAAAATACTGAAATAACGGAGAAGGCAGATGGGGATGTAGAGGAACATTGTCTTGCAGCTCCTCCAGAGAAGGTGGTTGAAGCTTTGATTGAACCTATCAATAACAAGGGTATGGATCCTGGAACTTCACCTGATTCTGAAGTTATCAATTCAATTCCCGAAATCCAGGTTGTGGAGAGACATCAAGAAGATTTACATGATGCTGTTTTAGGTTCTTCTAAAGAGTTAAATTCTAAATTGGATGCTACCATCAGTAGAAGAGGGAAGAAGAAAGACAAAGTTATCTGTTCAGGTATTTGTATCACTGAAGATGAATGTCAAGGTCCGCCTAGAAACAGTAGAGGTAAGCAGTCAAAGAACCGCAGGGCTAAGAAAAATTGTAGGGATGCAGTTAGCTCTTTGGAATTGTCTACTTTCACTCAGATGAGCAAATCTGTAAGCAGTAAAGAATTGTGCCCTGAATCATTGTCCCTTTCTGGAGAGACTGAACTTGGAGGCTCTGCTGAGGCTTTGAAAGTTAAAAATGACATGGACATTAAGATAAGTGGAAAACCATCAGTTGACAATGGATTTTCAGAATCTCAAGTTTCTGAAAATATGCTGTCTTCTGCAAGACCTTTGGGTCGTAAACTACCTAAAAGTCTTAGACCTAGTAAAGTAAGTAGGACCAAATTTAAAGCTTCTGACTCGGCTGACAGGAAAAAGACTACATGTACACGCAAGGAGAAACAGAAAAAGCCAATTAATAAGTCTGAAGTCAAGAGAAAAGGTGCCTCTCTTAAAATTACATGTGAAATGGAAGATCGTCCACATGCAGATGCAAATATTGGAAATTATAAGTTGGATGCTGTCGGAAAAATTAATGCTGAGGACAACAAAGTATCAGTCAACATATCTAATTTGGACATGCTGTCTGGTGTTGAACTGGGTGGGCAACTTCCATCTCCCCGTAATGCGTGGGTGCGATGTGATGATTGTTACAAGTGGAGGCGAATTCCAGCTGTGCTTGCAGACCAAATTGATGAAACTAACCGTACCTGGACATGTAAGGACAGCAGTGACAGAGCCTTTGCTGACTGTGCTGTCCCTCAAGAAAAGTCAAATGCAGAGATTAATGCAGAGTTGGGATTATCAGATGCCTCCGGTGAAGAAGATGCATATGAAGGCTCCAAAAATTTTAAGGAATTAGAATATCGGCCTCCATTTATTTCCCAGGGTTCAACTTTTACCCATATTTTCACCAATGAATTCCTACATCGTAGCCATAAAACTCAGACTATTGATGAGATAATGGTCTGTCATTGCAAGGCGTCTCAAGAAGGAAAGTTAGGCTGTGGTGATGAATGCCTAAATCGGATGCTTAATATTGAATGTGTACAAGGAACATGCCCGTGTGGGGACCGTTGTTCTAACCAGCAGTTCCAAAAACGCAAGTATGCTAATCTGAGGTGGTTTAAATGTGGGAAAAAGGGATATGGACTCAAGGCACTTGGGAATGTAGCTCAAGGCCAGTTTCTTATTGAATATGTTGGAGAGGTGCTTGATATGCATACGTATGAGGCTCGGCAAAGGGAATATGCTTTGAAGGGTCATCGACATTTCTATTTTATGACCTTGAATGGCAGTGAGGTGATAGATGCTAGTGCGAAAGGAAACTTGGGGCGTTTCATTAATCATAGTTGTGATCCTAATTGTCGGACCGAAAAGTGGATGGTGAATGGGGAGATCTGTATTGGACTGTTTGCATTGAGGGATATTAAGCAGGGTGAAGAATTGACGTTTGACTACAACTATGTAAGGGTTTTTGGTGCTGCTGCAAAAAAATGTTATTGTAGTTCACCTAGTTGTCGAGGCTATATAGGTGGTGGTGATCCACTTAATGCTGACCTGATTGTTCAAAGTGATTCAGAAGAAGAATTTCCAGAACCTGTTATGCTTACCAAAGATGGTGAAATTGAAGATGCTGTACCCATACCAAAGTATTTTAGTAATGTTGATACACAATCTGCTAGACATATGTTAAAAGGCAGGGATATATTGGAAAAGTCTACAGCTGCTATAGATTCGGATGGTTCTCCAGAGAAAGAAAGTTCCGTGAACCCTGCCTCTGCTGTTTCTCTGTTGCACAGCCCAGCAGAAATGGAGGATTCAAAGGGCAAGTTACCTTTTTCTGTTGAAGTTGAAGAAATTTCTCAACAAATGGAGGATGTAACAAGCAAACCCATGCTCACCGTACAAGGATATGAAAAGGAAAAGGAATCAGAGTTTGCAGACAAAACTTCCTCCACTCAAAGATTAGAGACTACTTCTCCCCTTACAACTGCTAGCAAAATGTTATCTAATTCTACTGGTAGTAATAGGGAGTCCAAGTCTGAAATAATTGAAGGCAGGAAGAATCCTAAGTTAAATAGTTCTGTTAAAAAAGGAAAGGTTCATGCTAATCTTCCAAATGGCCTTAAAGCTGAGGTGACATCCAATCGATTGCAGTTGTCATCCGTTAAACATAAAAAAGTAGAAGGTTCTTCCAATGGACGGTTTGAAGCAGTTCAGGAGAAACTTAATGAGTTGCTGGATGGAGATGGGGGAATAAGCAAAAGAAAGGACGCTACCAAAGGGTACTTGAAGCTTTTGTTTCTCACTGTGGCATCTGGTGATAGAAGCAACGGTGAAGCAATTCAAAGTAATCGAGATCTTTCCATGATACTTGATGCCCTTCTGAAAACAAAATCTAGAGCAGTGCTGAATGATATAATTAACAAAAATGGTTTACAGATGTTACATAACATTATGAAGCAGTACAGGCAGGACTTCAAAAAAATTCCTATACTGCGAAAGCTTCTTAAGGTCTTAGAGTACCTAGCCGCAAGCAAAATTTTGACACCTGAACAGATTAATGGTGGTCCTCCTTGTCATGGAATGGAGAGCTTTAGAGAGTCAATGCTTTCTCTGACAGAGCATGATGACAAGCAGGTCCATCAGATTGCTCGAAGCTTCCGAGACAGATGGTTTCCCAGACCCAACAGAAAACATGGGTATTTGGACAGGGATGATAATAGAATGGAATCTCATAGAAGTTTCAGTGGTAACAGATTTTCAGCATCACACAGTCATAGACCTGAGCAGGATTTAAGGGCTGCAGAAGTAATTGACTGTAGTCAGCAGTCTATGCTCGGGACAACTCCTGTAGATGCTGATACCCAGGAAAGCTGTCCTGCCCACTCTCTAGATGGGGTTGAAATCAAAGGAGCTAAAAAACGGAAGCGCAAAAGCCGATGGGATCAACCGGCAGAGACAAACTCACTCCCTGATGCCGTTATGAGCTCCATTGGTGAAAGCCAGAACATTCATGAGGATGTTCCACCAGGGTTTTCGTGTCCAATAGGTCCATTAAATGCTTCTGCCCTAAACTCTGGTAATCTTGTATTGCAAAATGCAAGCCGTTCTGGATGTCCCTCTGATTTAGTAGTTGGTCATTCGAAAAGGAAATTTAATTCTCGCTTGCCTGTGGCATATGGAATGCCATGGTCTGTTGCCCACCAATATGGAACACCTCATACTGAATTTCCAGAGCGTTGGGTCACTGCACCTGGCATACCTTTCGTTCCATTTCCTCCACTACCCCCATATCCTCGGGACAACAAAGACTGTCAACCTTGTAATAATAATAGTGCTATGATAATTGATCAGCCTGCTGAAGCTATGATAAGTGATCAGTCAGCTCAAGTTAAGGAGGGTGATAACAGTAGTATGGTCAGTTGTTGTGCAGATGATATGATTCCCTGCACAACTGGTGCTAACCCTGAAGAGTCAAACTTTCTGTTCGAGGAAAACGAAGCTAAACGAATGAAGGGTGACTCCCATGATTTGGTAAGGAAGTATTATAAACAGCAGAAATGGAATAACTCGAAAATACATCGACCATGGTTCCAGAGGAATGCATGGAAATGTAATGAGAACAACTCTAGTGGTGATATGTGCAGTATAGATGTAGATTTACCGAAAGAGTCGGAAGATACTTGTGATGCGGAGAATGCAATCTGTAGAGAGGAGAAAGGTGGTAATAATATTTATTAG 6063 0.4204 MGSCGRSVTANDRSGGSVIEQHLCSEVAEQVVSVQESCLEEACNVVDSNADLSTVTDGCVGEDLAGSARCLGEGSCDALGLASECENADLLSLEKTTEDDCLNCLGVSYGGIEVPCESSVFEGNVQGEGNFDLRSRSLTTDDSQRLCAQQSPATGNQSVVVEGEIDDTGLGDAFNHVLDFRDSEMSLELESVADLLVDCNQQNEQQEIMRNADPLLNVVENCDALIGKEADACRQISPTLDMEVPSGALCADTEVESTSDPKDGEDQNSTCEEKVKVFSDEEIIVINSCVKISSSPGCHGTVESSSVDSPCEPALLDAGREMKNDVLQIEDAFCKLKDCSSEETSNSTFRKPSSPESGLPSVASIANCSSKDVSDLHCKGDDVGNSTFRKPSSPESGLPSVASIANCSSKDVSDFHCNGDDVSTTTTIATNNAVDDLGQMDNDGKEAVEVDCITESIPLLSQRNSRRSKVGRKTQTKKASRRGKNKTKVTRPNGDYMKLYSEAARKKRSCFSKPARSSIWGSIGNIEQFFEQDNERAVSEAVCQELGKARSKRQSGKAVKNNASTGSLSSVQKCPISTSRVRLKIKFGKEPDLSCSNVLTPDSVDGLASASLLESGSASQKIACNLEDKMLKVVTLGNSESFNNDMDKDDLVRNEQVANSPLEENTEITEKADGDVEEHCLAAPPEKVVEALIEPINNKGMDPGTSPDSEVINSIPEIQVVERHQEDLHDAVLGSSKELNSKLDATISRRGKKKDKVICSGICITEDECQGPPRNSRGKQSKNRRAKKNCRDAVSSLELSTFTQMSKSVSSKELCPESLSLSGETELGGSAEALKVKNDMDIKISGKPSVDNGFSESQVSENMLSSARPLGRKLPKSLRPSKVSRTKFKASDSADRKKTTCTRKEKQKKPINKSEVKRKGASLKITCEMEDRPHADANIGNYKLDAVGKINAEDNKVSVNISNLDMLSGVELGGQLPSPRNAWVRCDDCYKWRRIPAVLADQIDETNRTWTCKDSSDRAFADCAVPQEKSNAEINAELGLSDASGEEDAYEGSKNFKELEYRPPFISQGSTFTHIFTNEFLHRSHKTQTIDEIMVCHCKASQEGKLGCGDECLNRMLNIECVQGTCPCGDRCSNQQFQKRKYANLRWFKCGKKGYGLKALGNVAQGQFLIEYVGEVLDMHTYEARQREYALKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQGEELTFDYNYVRVFGAAAKKCYCSSPSCRGYIGGGDPLNADLIVQSDSEEEFPEPVMLTKDGEIEDAVPIPKYFSNVDTQSARHMLKGRDILEKSTAAIDSDGSPEKESSVNPASAVSLLHSPAEMEDSKGKLPFSVEVEEISQQMEDVTSKPMLTVQGYEKEKESEFADKTSSTQRLETTSPLTTASKMLSNSTGSNRESKSEIIEGRKNPKLNSSVKKGKVHANLPNGLKAEVTSNRLQLSSVKHKKVEGSSNGRFEAVQEKLNELLDGDGGISKRKDATKGYLKLLFLTVASGDRSNGEAIQSNRDLSMILDALLKTKSRAVLNDIINKNGLQMLHNIMKQYRQDFKKIPILRKLLKVLEYLAASKILTPEQINGGPPCHGMESFRESMLSLTEHDDKQVHQIARSFRDRWFPRPNRKHGYLDRDDNRMESHRSFSGNRFSASHSHRPEQDLRAAEVIDCSQQSMLGTTPVDADTQESCPAHSLDGVEIKGAKKRKRKSRWDQPAETNSLPDAVMSSIGESQNIHEDVPPGFSCPIGPLNASALNSGNLVLQNASRSGCPSDLVVGHSKRKFNSRLPVAYGMPWSVAHQYGTPHTEFPERWVTAPGIPFVPFPPLPPYPRDNKDCQPCNNNSAMIIDQPAEAMISDQSAQVKEGDNSSMVSCCADDMIPCTTGANPEESNFLFEENEAKRMKGDSHDLVRKYYKQQKWNNSKIHRPWFQRNAWKCNENNSSGDMCSIDVDLPKESEDTCDAENAICREEKGGNNIY 2020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01299 2020 MobiDBLite consensus disorder prediction 769 790 - -
Phco7g01299 2020 SMART shorttest3 1091 1142 IPR006560 GO:0005634|GO:0042054
Phco7g01299 2020 FunFam Histone-lysine N-methyltransferase 975 1036 - -
Phco7g01299 2020 MobiDBLite consensus disorder prediction 845 917 - -
Phco7g01299 2020 Pfam SET domain 1154 1260 IPR001214 GO:0005515
Phco7g01299 2020 ProSiteProfiles Zinc finger CW-type profile. 977 1031 IPR011124 GO:0008270
Phco7g01299 2020 ProSiteProfiles SET domain profile. 1143 1260 IPR001214 GO:0005515
Phco7g01299 2020 Gene3D SET domain 1041 1292 IPR046341 -
Phco7g01299 2020 CDD SET_SETD2 1142 1284 IPR044437 GO:0010452|GO:0046975
Phco7g01299 2020 MobiDBLite consensus disorder prediction 466 487 - -
Phco7g01299 2020 MobiDBLite consensus disorder prediction 885 917 - -
Phco7g01299 2020 FunFam Histone-lysine N-methyltransferase 1042 1299 - -
Phco7g01299 2020 MobiDBLite consensus disorder prediction 1424 1452 - -
Phco7g01299 2020 MobiDBLite consensus disorder prediction 343 362 - -
Phco7g01299 2020 Gene3D - 980 1040 - -
Phco7g01299 2020 ProSiteProfiles Post-SET domain profile. 1268 1284 IPR003616 -
Phco7g01299 2020 ProSiteProfiles AWS domain profile. 1091 1141 IPR006560 GO:0005634|GO:0042054
Phco7g01299 2020 MobiDBLite consensus disorder prediction 462 492 - -
Phco7g01299 2020 Pfam AWS domain 1106 1140 IPR006560 GO:0005634|GO:0042054
Phco7g01299 2020 PANTHER SET DOMAIN PROTEINS 480 1761 - -
Phco7g01299 2020 MobiDBLite consensus disorder prediction 850 865 - -
Phco7g01299 2020 SMART set_7 1143 1266 IPR001214 GO:0005515
Phco7g01299 2020 MobiDBLite consensus disorder prediction 1726 1766 - -
Phco7g01299 2020 SUPERFAMILY SET domain 1071 1281 IPR046341 -
Phco7g01299 2020 MobiDBLite consensus disorder prediction 1412 1470 - -
Phco7g01299 2020 Pfam CW-type Zinc Finger 983 1029 IPR011124 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01299 Phco-Chr7 11645881 11660690 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phco7g01299 SET 1.3e-18 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01299 7 11645881 11660690 Phco7g01299 7 11645881 11660690 ECH