Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01270 ATGGTGAAGGTGAGCTGGTGGAGATGGTCTTCTCCCTTCGCTCTCATCTTAACGGCGTTTATTGGCGGCGTATGTGGTGGCAATGTCACCTACGACGGAAGATCCTTAATCGTTGATGGACAACATAGAATCCTCTTCTCCGGTTCAATTCATTATCCTCGTAGCACTCCTCAGATGTGGCCTAATTTAATTGCGAAAGCTAAGGAAGGTGGATTAGATGTCATACAAACTTACGTGTTTTGGAACCTTCACGAACCTCAACAAGGCCAGTATAACTTTAGAGGGAGGCATAATATAGTGAGATTCATTAAGGAAATTCAAGCGCAAGGTTTATATGTAACCCTCCGAATTGGACCATACATTGAGAGTGAATGCACATATGGGGGTCTACCAATATGGTTACATGATATTCCGGGTATCGTATTCAGATCTGACAATGAGCAATTCAAGTTTCACATGCAAAGGTTCGCTGCCAAAATAGTCAACGTTATGAAATCAGCCAATCTTTATGCTTCGCAAGGAGGACCTATCATACTATCACAGATTGAGAACGAATATGGGAACGTTGAAGGGGCATTTCACGAGAAAGGACTATCTTATATTCGTTGGGCTGCCCAAATGGCTGTGGGGCTCCAAACTGGTGTGCCTTGGGTGATGTGCAAGCAAGATAATGCTCCTGATCCCGTGATCAACACGTGCAATGGCATGCAGTGCGGGACAACTTTTAAGGGGCCTAATTCACCTAACAAGCCTTCACTATGGACAGAGAACTGGACAAGTTTTTACCAAGTCTTTGGTGGAGTACCATATGTAAGATCGGCTGAAGACATTGCATATAATGTTGCTCTGTTCATTGCAAAGAGAGGAAGCTATGTTAATTACTACATGTACCATGGAGGAACCAATTTCGACAGGATAGCCTCTGCTTTCGTAATGACAGCCTATTATGACGAAGCTCCATTGGATGAATATGGTTTGGTTAGGCAACCAAAATGGGGCCATCTTAAGGAGCTCCATGCAGCAATCAAGTCATGTTCAAAATCTCTACTTTTTGGTACTCAAACTAGCTTCAGCTTGGGCTCACGACAGAACGCTTATGTTTTCAAAAGTAGCTCAACAGAATGTGCTGCCTTCCTGGAAAATAGTGAAGATCGAAGTGTCACAATTCAATTTCAAAACATTCCATACCAATTACCCCCCAAATCAATCAGTATTCTACCAGACTGCAAGAATGTAGCCTTTAACACTGCCAAGGTACGCACACAAAATGACAGATCAATGAAACCCCATTTACAGTTCAATTCAGCTGAAAAATGGAAAGTGTACCAAGAAGCCATCCCGAGCGTTGACGATACTTCATTAAGAGCAAATAAACTATTGGATCAAATCAGCACAGCAAAAGATACATCTGACTATATGTGGTACACATTCAGGTTTAATGACAACTCTCCTAATGCTCAATCCATTCTAACTGCACACAGCCAAGGACATGTTTTGCATACCTTCATCAATGGAAATTTAGTAGGTTCTGCTCACGGAAGTCACAAAAATGCATCTTTTGTCATGGAAAATAAAGTCAATCTTATACAAGGGGCGAACAATATTTCTTTCCTCAGTGCAACAGTTGGATTGCCGAACTCAGGAGCATATCTAGAGCACAAAGTTGCCGGTTTAAGTGGAGTGAAAGTTCAAGGCCGAGATTTCACTAATCAAGCATGGGGATATCAGGTTGGGTTGTTGGGAGAAAAATTGCAAATCTACACAGCTAGTGGATCAAGTAAAGTTCACTGGGAAAGCTTTCAAAGCTCAACGAAGCCACTCACATGGTATAAGACCACATTTGATGCACCAGAGGGCAACGATCCACTAGCGCTTAACCTTGGTTCCATGGGAAAGGGTTATACTTGGGTTAATGGCCAAGGTATAGGCCGATATTGGGTATCTTTCCACACACCAAAGGGAACAGCTTCGCAAAAGTGGTACCACATACCACGATCCCTCCTAAAATCTACTGGGAACCTACTAGTTCTACTAGAAGAAGAAAGTGGGAACCCACTTGCAATCACTCTAGACATAGTTTACATCACATCACAGTAA 2097 0.4254 MVKVSWWRWSSPFALILTAFIGGVCGGNVTYDGRSLIVDGQHRILFSGSIHYPRSTPQMWPNLIAKAKEGGLDVIQTYVFWNLHEPQQGQYNFRGRHNIVRFIKEIQAQGLYVTLRIGPYIESECTYGGLPIWLHDIPGIVFRSDNEQFKFHMQRFAAKIVNVMKSANLYASQGGPIILSQIENEYGNVEGAFHEKGLSYIRWAAQMAVGLQTGVPWVMCKQDNAPDPVINTCNGMQCGTTFKGPNSPNKPSLWTENWTSFYQVFGGVPYVRSAEDIAYNVALFIAKRGSYVNYYMYHGGTNFDRIASAFVMTAYYDEAPLDEYGLVRQPKWGHLKELHAAIKSCSKSLLFGTQTSFSLGSRQNAYVFKSSSTECAAFLENSEDRSVTIQFQNIPYQLPPKSISILPDCKNVAFNTAKVRTQNDRSMKPHLQFNSAEKWKVYQEAIPSVDDTSLRANKLLDQISTAKDTSDYMWYTFRFNDNSPNAQSILTAHSQGHVLHTFINGNLVGSAHGSHKNASFVMENKVNLIQGANNISFLSATVGLPNSGAYLEHKVAGLSGVKVQGRDFTNQAWGYQVGLLGEKLQIYTASGSSKVHWESFQSSTKPLTWYKTTFDAPEGNDPLALNLGSMGKGYTWVNGQGIGRYWVSFHTPKGTASQKWYHIPRSLLKSTGNLLVLLEEESGNPLAITLDIVYITSQ 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01270 698 SUPERFAMILY Galactose-binding domain-like 403 553 IPR008979 -
Phco7g01270 698 Pfam Glycosyl hydrolases family 35 35 341 IPR031330 -
Phco7g01270 698 Gene3D Glycosidases 25 346 - -
Phco7g01270 698 FunFam Beta-galactosidase 295 421 - -
Phco7g01270 698 Pfam Beta-sandwich domain in beta galactosidase 349 419 IPR041392 -
Phco7g01270 698 FunFam Beta-galactosidase 575 698 - -
Phco7g01270 698 FunFam Beta-galactosidase 25 345 - -
Phco7g01270 698 SUPERFAMILY (Trans)glycosidases 28 345 IPR017853 -
Phco7g01270 698 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 174 186 IPR019801 GO:0004553|GO:0005975
Phco7g01270 698 PANTHER BETA-GALACTOSIDASE RELATED 19 693 IPR001944 GO:0004553|GO:0005975
Phco7g01270 698 Gene3D - 575 695 - -
Phco7g01270 698 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Phco7g01270 698 PRINTS Glycosyl hydrolase family 35 signature 309 325 IPR001944 GO:0004553|GO:0005975
Phco7g01270 698 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Phco7g01270 698 PRINTS Glycosyl hydrolase family 35 signature 605 619 IPR001944 GO:0004553|GO:0005975
Phco7g01270 698 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Phco7g01270 698 PRINTS Glycosyl hydrolase family 35 signature 253 268 IPR001944 GO:0004553|GO:0005975
Phco7g01270 698 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Phco7g01270 698 PRINTS Glycosyl hydrolase family 35 signature 290 305 IPR001944 GO:0004553|GO:0005975
Phco7g01270 698 PRINTS Glycosyl hydrolase family 35 signature 632 648 IPR001944 GO:0004553|GO:0005975
Phco7g01270 698 SUPERFAMILY Galactose-binding domain-like 572 695 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01270 Phco-Chr7 11363594 11371700 Dispersed/Wgd