Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01267 ATGAAATTCGATTACTGGATCCTGCTTCTGTCAATCCTTCTCGCACTCTCGGCGGAGATTTCTGTCGCCGAGCCCACTCCCTCCGCGGCCTACGACCACGTTCTGTTTCCGGATCGGCGATGCCAAAGGCTGGTGTCGGAGAACAGCACACGGCGCGGCACGTCAGCGGCGGCGGCTGAGTGCGAGGTGTGGAGCGAGGCGTGTTCGGAAGCGGTGCTGAGTGTAGCGCGGCGGTCGGAGACGGCGGAGTGGCTGAGAGGGATTCGGCGGAAGATCCACGCAAATCCTGAGTTGGCGTTTGAGGAAATCGAGACGAGTCGTTTGGTGAGAGAGGAGTTGGATCTGATGGAAGTTAGTTATCGGTACCCTCTCGCGAAGACCGGTATTCGAGCTTGGATCGGCACTGGTGGTCCTCCTTTTGTTGCTATCAGAGCTGACATGGACGCACTTCCCATCCAGGAAGCTGTGGAGTGGGAGCACAGGTCTAAAGTTGCCGGCAAAATGCATGCTTGTGGGCACGACGCTCACGTCGCTATGCTTGTTGGCGCTGCCAAGATCTTGAAAAGTCGAGAGCATTTATTAAAGGGAACTGTAATTTTGATATTCCAGCCAGCTGAAGAAGCTGGTAATGGAGCAAAAAGAATGATGCAAGATGGTGCTTTGGAGGACGTGGAGGCAATATTTGCAGCCCATGTATTCCATGAACATCCAACTGGTATAATTGGGTCAAGGCCTGGGCCCCTCCTGGCTGGTTGTGGGTTTTTCAGAGCCATCATCAGTGGCAAAAAGGGTTTTGCTGCCGATCCTCACCGTTCGGTTGATCCTGTTTTGGCTGCTTCAGCTTCTGTGATCAGCTTACAGGGTATTGTCTCCCGCGAATCAAATCCACTGGATTCTCAGGTTGTCTCTGTAACTTCGTTTAATGGAGGAAACAATCTTGACATGATACCAGACAGAGTGATCCTAGGTGGGACTTTCAGAGCCTTCTCTAACACCAGCTTTTACCAGTTACTTGAAAGAATAGAACAGGTGATTGTTGAACAGGCCAGTGTTTATAGATGCTCGGCAGAAGTAGACTTCTTTGAAAAGGAGTACACCATTTATCCTCCAACAGTAAATGATGAGCGAATGTATGAGCATGTGAAGAAGGTGTCTATTGATTTGTTGGGACAGAAGAATTTCAGGGTAGTTCCACCTATGATGGGTGCTGAAGATTTCTCCTTCTACTCCGAGGTGGTTCCCTCAGCTTTCTTCTACATAGGGATAAGGAATGAAACATTGGGGTCCACTCATACCGGACACTCTCCATATTTCATGATTGATGAAGACGTTCTACCAATAGGTGCTGCTACACATGCTACTATTGCAGAAAGGTACCTCATTGAACATGGTTCATGA 1398 0.4971 MKFDYWILLLSILLALSAEISVAEPTPSAAYDHVLFPDRRCQRLVSENSTRRGTSAAAAECEVWSEACSEAVLSVARRSETAEWLRGIRRKIHANPELAFEEIETSRLVREELDLMEVSYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEHRSKVAGKMHACGHDAHVAMLVGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMQDGALEDVEAIFAAHVFHEHPTGIIGSRPGPLLAGCGFFRAIISGKKGFAADPHRSVDPVLAASASVISLQGIVSRESNPLDSQVVSVTSFNGGNNLDMIPDRVILGGTFRAFSNTSFYQLLERIEQVIVEQASVYRCSAEVDFFEKEYTIYPPTVNDERMYEHVKKVSIDLLGQKNFRVVPPMMGAEDFSFYSEVVPSAFFYIGIRNETLGSTHTGHSPYFMIDEDVLPIGAATHATIAERYLIEHGS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01267 465 Gene3D Zn peptidases 87 445 - -
Phco7g01267 465 Pfam Peptidase family M20/M25/M40 142 457 IPR002933 GO:0016787
Phco7g01267 465 CDD M20_IAA_Hyd 85 460 IPR044757 GO:0009850|GO:0016787
Phco7g01267 465 NCBIfam amidohydrolase 86 448 IPR017439 GO:0016787
Phco7g01267 465 Gene3D - 250 368 - -
Phco7g01267 465 FunFam N-acetyldiaminopimelate deacetylase 250 368 - -
Phco7g01267 465 PIRSF Amidohydrol_AmhX 73 463 IPR017439 GO:0016787
Phco7g01267 465 SUPERFAMILY Bacterial exopeptidase dimerisation domain 251 360 IPR036264 -
Phco7g01267 465 SUPERFAMILY Zn-dependent exopeptidases 79 462 - -
Phco7g01267 465 PANTHER PEPTIDASE M20 FAMILY MEMBER 65 463 IPR017439 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01267 Phco-Chr7 11292272 11299962 Dispersed/Transposed