Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01264 ATGGCGCGTAGGGTTTCGATTTGTTCCTTCTTCTTCGTGTTCGCACTTTCTCTTATTGCGTCTCAGATCTCTGCCGAGGAGTCCTCTGAGACTAAGGAATTCGTGCTCACACTGGATCACTCGAACTTTCACGACACTGTCAGCAAGCACGATTTCATCGTTATCGAGTTCTACGCTCCATGGTGTGGCCACTGCAAGAAGCTTGCTCCCGAGTTTGAGAAAGCTGCTTCTATCTTGAGCAGTCATGATCCTCCGATTGTTTTGGCTAAAGTTGACGCCAATGAAGAGAAGAACAAAGAACTTGCAACGGAATATGACGTTAAGGGATACCCGACAATTAAGATTGTGAGAAATGGGGGAAAGAATGTTCAGGAATACAAGGGTCCTCGTGAAGCCGATGGCATCGTTGACTATTTGAAGAAACAGAGTGGTCCTGCTTCAACAGAAATTAAATCTGCTGATGAAGCTACAGCTTTGATTGGTGAAAATAAAGTTGCTATTGTTGGAGTTTTCCCGAAATTTTCTGGGGAGGAGTTTGATAACTTTATTGCCCTAGCAGAGAAGTTGCGTGCTGAGTATGACTTTGGTCACACTCTGAATGCCAAACACCTTCCAAGAGGTGAATCATCAGTCGCTGGCCCTTTAATTAGGTTATTCAAGCCGTTCGATGAACTTTTTGTTGACTCCAAGGATTTCCATGTGGATGCCCTAGAGAAATTTGTTGAGGATTCCAGTATCCCTGTCGTTACTGTCTTTAACAATGATCCTAGCAATCACCCTTTTGTTGTTAAATTCTTCAACAGCCCCAATGCAAAGGCAATGATGTTCATCAACTTCACTGCTGAAAGTGCTGAATCTTTCAAATCAAAATACCGTGAAGCTGCTGAGCAATATAAACAACAGGGTGTAAGCTTTCTGGTTGGAGATGTTGAGTCTAGTCAAGGAGCTTTCCAGTATTTTGGACTGAAGGAAGAACAAGTACCTTTAATTATCATACAACATAATGACGGGAAGAAATTTTTTAAATCCAATTTGGAAGCCGATCACATTCCAACTTGGTTGAAGGCATACAAGGAGGGTAATATTGCACCATATGTGAAATCTGAACCTATTCCTGAAACTAACAATGAACCAGTTAAAGTGGTAGTTGGGGAGAATCTCCAGGACATCGTTTTCAAGTCTGGGAAGAATGTTCTGCTTGAGTTTTACGCTCCCTGGTGTGGTCATTGCAAACAGTTGGCTCCTATATTGGAGGAAGTTGCTATCTCATATCAAAATGATGCTAATGTTATCATTGCCAAACTGGATGCAACTGCCAACGATATCCCAAGTGATACCTTTGATGTCCAAGGACCAAGGAAGACATCATAG 1371 0.423 MARRVSICSFFFVFALSLIASQISAEESSETKEFVLTLDHSNFHDTVSKHDFIVIEFYAPWCGHCKKLAPEFEKAASILSSHDPPIVLAKVDANEEKNKELATEYDVKGYPTIKIVRNGGKNVQEYKGPREADGIVDYLKKQSGPASTEIKSADEATALIGENKVAIVGVFPKFSGEEFDNFIALAEKLRAEYDFGHTLNAKHLPRGESSVAGPLIRLFKPFDELFVDSKDFHVDALEKFVEDSSIPVVTVFNNDPSNHPFVVKFFNSPNAKAMMFINFTAESAESFKSKYREAAEQYKQQGVSFLVGDVESSQGAFQYFGLKEEQVPLIIIQHNDGKKFFKSNLEADHIPTWLKAYKEGNIAPYVKSEPIPETNNEPVKVVVGENLQDIVFKSGKNVLLEFYAPWCGHCKQLAPILEEVAISYQNDANVIIAKLDATANDIPSDTFDVQGPRKTS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01264 456 SUPERFAMILY Thioredoxin-like 245 376 IPR036249 -
Phco7g01264 456 NCBIfam protein disulfide-isomerase domain 39 142 IPR005788 GO:0003756
Phco7g01264 456 CDD PDI_a_PDI_a'_C 378 448 - -
Phco7g01264 456 Pfam Thioredoxin-like domain 171 355 - -
Phco7g01264 456 Gene3D Glutaredoxin 373 452 - -
Phco7g01264 456 NCBIfam protein disulfide-isomerase 35 451 IPR005792 GO:0003756
Phco7g01264 456 FunFam Protein disulfide-isomerase 23 142 - -
Phco7g01264 456 Gene3D Glutaredoxin 143 247 - -
Phco7g01264 456 SUPERFAMILY Thioredoxin-like 35 145 IPR036249 -
Phco7g01264 456 FunFam Protein disulfide-isomerase 244 373 - -
Phco7g01264 456 CDD PDI_a_family 36 139 - -
Phco7g01264 456 Pfam Thioredoxin 379 451 IPR013766 -
Phco7g01264 456 Pfam Thioredoxin 35 141 IPR013766 -
Phco7g01264 456 SUPERFAMILY Thioredoxin-like 148 247 IPR036249 -
Phco7g01264 456 FunFam Protein disulfide-isomerase 143 243 - -
Phco7g01264 456 ProSiteProfiles Thioredoxin domain profile. 357 456 IPR013766 -
Phco7g01264 456 SUPERFAMILY Thioredoxin-like 346 451 IPR036249 -
Phco7g01264 456 Gene3D Glutaredoxin 20 142 - -
Phco7g01264 456 CDD PDI_b_family 147 243 - -
Phco7g01264 456 ProSitePatterns Thioredoxin family active site. 399 417 IPR017937 -
Phco7g01264 456 ProSiteProfiles Thioredoxin domain profile. 14 144 IPR013766 -
Phco7g01264 456 CDD PDI_b'_family 262 358 - -
Phco7g01264 456 Gene3D Glutaredoxin 248 372 - -
Phco7g01264 456 ProSitePatterns Thioredoxin family active site. 54 72 IPR017937 -
Phco7g01264 456 PANTHER PROTEIN DISULFIDE ISOMERASE 11 451 - -
Phco7g01264 456 PRINTS Thioredoxin family signature 61 70 - -
Phco7g01264 456 PRINTS Thioredoxin family signature 106 117 - -
Phco7g01264 456 PRINTS Thioredoxin family signature 53 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01264 Phco-Chr7 11251445 11255010 Dispersed/Tandem