Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01260 ATGATGTCGGACAAGGATTCACAGACACAGGAGAAGGTGTTTGACGCAGAAACGGCGTCGTCGCTGGTGAAGGAGTTGAGGAAGAACTTTGGTTCAGGAAGGACGCGAAGTTATGAGTGGAGAGTGTCGCAGGTGAAGGCTCTCTTGAAAGCGATGGTTGATAACGAAGACCAAATCGTCGATGCTCTTCGATCAGACCTAGCCAAGCCTTCACTCGAAACTGTCGTATACGAGATTGGTATGTTTAAAAGCTCTTGTGAAGTAATACTGAAGGAATTGAAGCATTGGATGACGCCAGAAAAGGTCAAAACATCAATCAAAACTTTTCCTTCTTCAGCTGAAATAGTACCAGAACCGCTGGGTGTTGTGTTAGTCATCTCTCCATGGAACTATCCAATTTTGTTGACCCTTGAACCAGTAGTTGGAGCTATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTGCTCCAGCCACATCATCACTACTAGCGAAATTGATAGAGAAGTATATGGATCACTCGTTTGTAAGAGTTGTCCAGGGGGCAGTTGATGAAGCAACTGCACTATTGCAGCAAAAGTGGGACAAAATTTTCTACACAGGTAATGGAAGAGTTGGAAGAATAGTGATGACTGCTGCTGCAAAACACCTAACACCAGTTTTGCTGGAGCTTGGAGGAAAATCTCCCGTTGTCGTTGATTCAAATATCAACTTGCAGGTAGCAGCTAGACGAATAATTTCTGGCAAGTGGGGATTGAACAGTGGACAAACGTGCATTTCTCCCGATTACGCTATAACAACAAAAGACTATGCTCCTACGTTGGTGGATACCCTGAAGACTGAATTGCAGGAGTGTTACGGTAAGAATCCGTTGGAATCAGAAGATTTGTCTCGAATTGTGAGTTCCAACCACTTTGCTCGCTTATCAAAGCTCTTGAATGATGATAAGGTTTCTGGCAAGATTGTTTATGGAGGTGAAAAGGATGAAAATAAATTAAGGATTGCTCCCACGATTCTATTGGATGTTCCGCGAGATTCTCTGATAATGGGTGAGGAGATATTCGGGCCATTGCTTCCCATCATCACGGTCAATAAAATTGAAGAAAGTCTAGATGTAATCAACTCAGGAGAGAAGGCCCTCGCTGCATATGTATTTACAACCGACGAGAAGTTCAAGGAGCTGTTCGTAAGGAATGTTTCCGCTGGAGGTTTGCTTGTCAATGATACTACCGTACATCTTTTGGTTGATACTTTGCCATTTGGGGGAGTTGGAGAGAGTGGAATGGGTGCATACCATGGCAAGTTCTCCTTTGATGCTTTTACACACAAAAAGGCTGTTCTTTATCGGAGTTTTGCGGGTGATTCGTCGTCAAGGTACCCACCATACACGGATACAAAGCAAAGATTGATGAAAGCTCTGATTGCTGGTAGCGTCCTTGGCATAATTCGTGCTCTTTTCGGATGGTCCTAA 1476 0.4383 MMSDKDSQTQEKVFDAETASSLVKELRKNFGSGRTRSYEWRVSQVKALLKAMVDNEDQIVDALRSDLAKPSLETVVYEIGMFKSSCEVILKELKHWMTPEKVKTSIKTFPSSAEIVPEPLGVVLVISPWNYPILLTLEPVVGAIAAGNAVVLKPSEIAPATSSLLAKLIEKYMDHSFVRVVQGAVDEATALLQQKWDKIFYTGNGRVGRIVMTAAAKHLTPVLLELGGKSPVVVDSNINLQVAARRIISGKWGLNSGQTCISPDYAITTKDYAPTLVDTLKTELQECYGKNPLESEDLSRIVSSNHFARLSKLLNDDKVSGKIVYGGEKDENKLRIAPTILLDVPRDSLIMGEEIFGPLLPIITVNKIEESLDVINSGEKALAAYVFTTDEKFKELFVRNVSAGGLLVNDTTVHLLVDTLPFGGVGESGMGAYHGKFSFDAFTHKKAVLYRSFAGDSSSRYPPYTDTKQRLMKALIAGSVLGIIRALFGWS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01260 491 FunFam Aldehyde dehydrogenase 228 428 - -
Phco7g01260 491 SUPERFAMILY ALDH-like 22 454 IPR016161 GO:0016491
Phco7g01260 491 PIRSF ALDH 3 486 IPR012394 GO:0006081
Phco7g01260 491 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 446 IPR016162 GO:0016491
Phco7g01260 491 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 224 231 IPR029510 GO:0016491
Phco7g01260 491 PANTHER ALDEHYDE DEHYDROGENASE 18 481 IPR012394 GO:0006081
Phco7g01260 491 FunFam Aldehyde dehydrogenase 27 231 - -
Phco7g01260 491 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 228 428 IPR016163 GO:0016620
Phco7g01260 491 Pfam Aldehyde dehydrogenase family 15 448 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01260 Phco-Chr7 11184694 11188604 Dispersed/Transposed