Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01257 ATGCTTCCGGGTCTTTCTAACCAACGCACCCACACTCACCACTCTCAATCTCTCTTTCGTCTTCTCAAACGTAACCACTCTCACTTCCGTCCAGGAGATAGCAAAACGATGCCGTTTCGGTCTCCACCGAGGTCGAAACTATCAACCAAGCTCCTCAACATAACCATATCTTCGCTGTGCAAAAAGAAGCAAATATCCAAAGCGGAATCCGTAATAACCGACGGCATAAGAATCGGCGTGCTACCCGACGCGGTCACATACAACACCCTAATTGATGCCTACTGTCGTTTCGCCTCCATCGATGTCGCTTATTCCGTCCTTGCGCGAATGCGCGAAGCAGGGATTCCCCCCGACGTCGTTTCGTACAATTCGTTAGTCTCCGGCGCCGTCAGAAAGTGTCTGCTCTCCAAGTCCCTCGACCTGTTCGAGGAAATGATGGCGAGTGGGGTAACCCCCGACGCCTGGAGCCACAACATCCTAATGCACTGTCTGTTCAAGCTCGGAAAGCCCTACGAGGCCAATCGCGTTTTCAAAGAATCCGTTCTCCGCGGCGAGGTTCACGCCACCACTTACAACGTCATGATTAACGGTCTCTGCAAGAACGGCTACGTCTCCCACGCCTTGAGCCTATTCAGGAACTTACAGAGGCACGGTTTCGTGCCTCAGGTTTTAACCTACAACGCGCTTATCAACGGGCTCTGCAAGGCCAAGCGGTTGAAGGACGCGCGGAAGGTGCTCAAGGAGTTTGGGGAATCCGGTTACGAACCGAATGCGATTACTTACACCACCGTCATGAAGTGCTGCTTCCGGTGCGGTTATTTCGAGCAAGGGTTGGAGATTTTGTCGGAGATGAGGAATTTAGGGTTCACGTTTGACGGATTCGCGTATTGCACGGTTATCGCGGCGATGATCAAGACTGGCCGGATGCGCGAGGCGGAGGAGATAATTGAAATCATGGTGAGTTCCGGCATTCGGCCGGATCTCGTGTCGTATAACACTTTGATTAACCTTTATTGCAGGCAGGGGAGGTTGGAGGATGCATTGAAATTGTTGGATGAGATTGAGGAGGAGGGCTTGGAGTGTGATCAGTACACGCATACTATTATTGTTGATGGATTGTGTAAGGCTGGTGATTTTGATGGTGCTCAGAGGCACTTGAATTATATGAATACATTAGGGTTTGGATATAATTTGGTTGCATTTAATTGTATGCTTGATGGCTTGGGGAAGGCTGGACATATCGATCATGCTGTGAAGTTGTTTGAGATGATGGAGGTGAAGGATTCGTTTACTTATACTATATTGGTGCACAACCTTTGCAGGGCGGGGAGCTTCCTTTGTGCCTCGAAGGTGCTGCTTTCGTGTTTGAAATGTGGGTACCAGGTGTTGAGGGCCACTCAGCGGGCGGTTCTTGATGGCCTCCGGAGTATTGGGTTTACTAATGAAGCGAGGAAGCTTAGGTCGAGGATTAGATTGGCACGGCTTATGACTTGA 1494 0.502 MLPGLSNQRTHTHHSQSLFRLLKRNHSHFRPGDSKTMPFRSPPRSKLSTKLLNITISSLCKKKQISKAESVITDGIRIGVLPDAVTYNTLIDAYCRFASIDVAYSVLARMREAGIPPDVVSYNSLVSGAVRKCLLSKSLDLFEEMMASGVTPDAWSHNILMHCLFKLGKPYEANRVFKESVLRGEVHATTYNVMINGLCKNGYVSHALSLFRNLQRHGFVPQVLTYNALINGLCKAKRLKDARKVLKEFGESGYEPNAITYTTVMKCCFRCGYFEQGLEILSEMRNLGFTFDGFAYCTVIAAMIKTGRMREAEEIIEIMVSSGIRPDLVSYNTLINLYCRQGRLEDALKLLDEIEEEGLECDQYTHTIIVDGLCKAGDFDGAQRHLNYMNTLGFGYNLVAFNCMLDGLGKAGHIDHAVKLFEMMEVKDSFTYTILVHNLCRAGSFLCASKVLLSCLKCGYQVLRATQRAVLDGLRSIGFTNEARKLRSRIRLARLMT 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01257 497 Gene3D Tetratricopeptide repeat domain 186 287 IPR011990 GO:0005515
Phco7g01257 497 Gene3D Tetratricopeptide repeat domain 8 185 IPR011990 GO:0005515
Phco7g01257 497 Pfam PPR repeat family 326 375 IPR002885 -
Phco7g01257 497 Pfam PPR repeat family 189 235 IPR002885 -
Phco7g01257 497 Pfam PPR repeat family 82 128 IPR002885 -
Phco7g01257 497 Pfam PPR repeat family 397 441 IPR002885 -
Phco7g01257 497 SUPERFAMILY HCP-like 232 423 - -
Phco7g01257 497 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 257 291 IPR002885 -
Phco7g01257 497 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 118 152 IPR002885 -
Phco7g01257 497 Pfam PPR repeat 259 289 IPR002885 -
Phco7g01257 497 Pfam PPR repeat 295 324 IPR002885 -
Phco7g01257 497 Pfam PPR repeat 156 183 IPR002885 -
Phco7g01257 497 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 397 431 IPR002885 -
Phco7g01257 497 PANTHER RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED 45 389 - -
Phco7g01257 497 NCBIfam pentatricopeptide repeat 190 222 IPR002885 -
Phco7g01257 497 NCBIfam pentatricopeptide repeat 85 119 IPR002885 -
Phco7g01257 497 NCBIfam pentatricopeptide repeat 259 290 IPR002885 -
Phco7g01257 497 NCBIfam pentatricopeptide repeat 225 258 IPR002885 -
Phco7g01257 497 NCBIfam pentatricopeptide repeat 399 427 IPR002885 -
Phco7g01257 497 NCBIfam pentatricopeptide repeat 295 327 IPR002885 -
Phco7g01257 497 NCBIfam pentatricopeptide repeat 120 154 IPR002885 -
Phco7g01257 497 NCBIfam pentatricopeptide repeat 156 184 IPR002885 -
Phco7g01257 497 NCBIfam pentatricopeptide repeat 329 362 IPR002885 -
Phco7g01257 497 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 83 117 IPR002885 -
Phco7g01257 497 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 187 221 IPR002885 -
Phco7g01257 497 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 292 326 IPR002885 -
Phco7g01257 497 Gene3D Tetratricopeptide repeat domain 376 489 IPR011990 GO:0005515
Phco7g01257 497 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 222 256 IPR002885 -
Phco7g01257 497 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 327 361 IPR002885 -
Phco7g01257 497 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 362 396 IPR002885 -
Phco7g01257 497 Gene3D Tetratricopeptide repeat domain 288 357 IPR011990 GO:0005515