Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01256 ATGACCCATCCTGGGAGACGACCGAAGTCTCTCACTGGGAGACGACCGAAGTCTCTCGCTGGGAGACGACCGAAGTCTCTCGCTGGGAGACGACCTGGCGATGCCTGCATGCCTCGCGCCTGGCGATCAGTCACTATTGTCACTTCTGAGGAAGAGTTTAGAAACATTGGCCTATCAATGACGACCCATCCCATGGAAATTGACAGCGACGGCGATGACCACACACACTCCGCCGGCGAAAGTGTCATAGTTGCCGGAGACCTTCCCGCTTTCGACAAGGCCATTCCGTGGGTTGAAAAATACCGCCCTCAGTCCCTCGACGACGTGGCCGCTCACCGTGACATTGTTGATACCATTGATAGGCTGACCACAGAGAACCGATTGCCGCATCTTTTATTGTATGGCCCTCCTGGAACGGGCAAAACATCAACCATTCTCGCTGTGGCACGCAAACTATATGGTTCACGCTTCCGCAATATGATTTTGGAGCTCAATGCATCAGATGACAGAGGAATTGATGTCGTGCGACAGCAGATTCAAGATTTTGCTAGCACTCAGAGCTTATCATTTGGTGTTAAGTACTCTGTAAAACTGGTATTGTTAGATGAAGCAGATGCCATGACAAAGGATGCCCAATTTGCATTACGTAGAGTGATTGAGAAATATACAAAAAGCACCAGGTTTGCTCTTATCTGTAATCATGTAAACAAGATTATTCCTGCACTTCAATCTAGATGCACTCGGTTCCGGTTTGCCCCTCTTGACGCCGTCCATGTCACTGAAAGAATGAAACATGTTATTGAGGCTGAAGGGCTTGATGTTCAAGATGATGGCTTAGTAGCCCTTGTTCGGCTTAGCAATGGTGATATGAGAAAAGCTTTGAATATTCTTCAGTCAACACATATGGCTACTCAGCAGATAACAGAAGAAGCTGTGTACCTGTGCACTGGAAATCCATTGCCCAAAGACATTGAGCAAATATCTTACTGGCTTCTAAACGAACAATTTACAGATAGCTTTAAAAGAATAGAAGAAATGAAGACCAGGAAAGGGTTGGCCCTGGTTGATATTATCAGAGAAGTGATAATGTTTGTTTTTAAGATTAAGATGCCTTCAGCTGTTCGAGTACAATTGATGAATGATTTGGCAGACATAGAGTACAGATTAAGTTTTGGGTGCAACGATAAGCTTCAGCTTGGATCGGTCATTGCTTCTTTTACACGTGCTAGATCTGCACTGGTTGCAGCTGCTACATAG 1257 0.4574 MTHPGRRPKSLTGRRPKSLAGRRPKSLAGRRPGDACMPRAWRSVTIVTSEEEFRNIGLSMTTHPMEIDSDGDDHTHSAGESVIVAGDLPAFDKAIPWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSRFRNMILELNASDDRGIDVVRQQIQDFASTQSLSFGVKYSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERMKHVIEAEGLDVQDDGLVALVRLSNGDMRKALNILQSTHMATQQITEEAVYLCTGNPLPKDIEQISYWLLNEQFTDSFKRIEEMKTRKGLALVDIIREVIMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAAT 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01256 418 Pfam Replication factor C C-terminal domain 319 405 IPR013748 -
Phco7g01256 418 FunFam Replication factor C subunit 5 89 254 - -
Phco7g01256 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 312 IPR027417 -
Phco7g01256 418 Gene3D - 319 416 - -
Phco7g01256 418 SUPERFAMILY post-AAA+ oligomerization domain-like 319 409 IPR008921 GO:0003677|GO:0006260
Phco7g01256 418 MobiDBLite consensus disorder prediction 1 21 - -
Phco7g01256 418 Gene3D - 90 253 IPR027417 -
Phco7g01256 418 Pfam ATPase family associated with various cellular activities (AAA) 131 251 IPR003959 GO:0005524|GO:0016887
Phco7g01256 418 CDD HLD_clamp_RFC 254 316 - -
Phco7g01256 418 CDD AAA 115 253 - -
Phco7g01256 418 Gene3D - 257 318 - -
Phco7g01256 418 FunFam Replication factor C subunit 5 319 416 - -
Phco7g01256 418 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 95 400 - -
Phco7g01256 418 SMART AAA_5 127 257 IPR003593 GO:0016887
Phco7g01256 418 MobiDBLite consensus disorder prediction 1 35 - -
Phco7g01256 418 FunFam Replication factor C subunit 5 256 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01256 Phco-Chr7 11154206 11164576 Dispersed