Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01249 ATGGTGGTGTTTGCGGTGGAGGATGCGTCGCACGGTGGGGACGCTGGCGATGGAGGAGGCTCGCGCTCGCAGCGGAGGACGCTCGTGCTCACGGTGGTTCGCGCCGTGCTCGTCCTCGCGTCGCTGGCTCGCGGTGGTTCACGCCGTGCTTGTGCTCGCGTAGCTGGCTCGCGGTGGTTCACGCCGCGCTCGTACTCACGTCGCTGGCTCGCGGTGGTTCGCGCCGCGCTCGTGGTGGAGAGGGCTCGCGTCGCTGGCTCGCGGTGGAGGAGGCTCACGTCGCAGTGGAGAGGGCTCGCGTCGCTGGCTCGCGGTGGAGGAGGCTCACGTCGCAGTGGAGGAGGCTCGCGTCGCAGTGGAGGAGGCTCTCGTCATGGTGGTTGCAGTGGTGGTTCGCGGTGGAGGAGAATAGGAATTGGGATTTTAGGGTTCAGGCACAGTGTGAGGAAGTTAGGGTGTAAAGTGGTGCAAATGGCAGTGGGAAAGAACAAAAGGATATCGAAGGGGAAGAAGGGTGGCAAGAAGAAGGCCACTGATCCTTTCACCAAGAAGGATTGGTACGACATCAAGGCTCCTTCTGTGTTTCAGGTCAAGAATGTCGGGAAGACTCTCGTCACTCGTACTCAGGGCACCAAGATTGCTTCGGATGGACTCAAACATCGAGTGTTTGAGGTCTCACTGGCTGATCTTCAAGGTGACGAGGACCATGCTTTCAAGAAGATTCGTTTGAGGGCTGAGGATGTTCAAGGGAAAAATGTTCTGACGAACTTCTGGGGAATGGATTTCACAAATGACAAGTTGAGGTCATTGGTGCGAAAATGGCAAACTTTAATCGAGGCTCATGCCGATGTGAAGACCACTGATAATTATACTTTGAGGATGTTCTGCATTGGGTTTACTAAGAGGCGTAGTAACCAGGTGAAGAGGACATGTTATGCACAATCGAGCCAAGTTAGACAGATTCGAAGGAAGATGAGGGAGATAATGATCAACCAAGCAACATCCTGCGATTTGAAAGAACTGGTTCGTAAGTTCATCCCTGAGATGATTGGAAAAGAGATTGAGAAGGCAACGTCCAGTGTGTATCCTCTACAGAATGTGTTTATTCGTAAAGTTAAGATCCTGAAAGCCCCGAAGTTTGATCTTGGGAAACTGATGGAGATTCATGGAGATTACTCAGAAGATATTGGTACAAAAGTGGAAAGGCCTGTTGCCGAAACAATGGTTGAGGGAGCCACTGAAGTAGTTGGAGCTTGA 1257 0.5282 MVVFAVEDASHGGDAGDGGGSRSQRRTLVLTVVRAVLVLASLARGGSRRACARVAGSRWFTPRSYSRRWLAVVRAALVVERARVAGSRWRRLTSQWRGLASLARGGGGSRRSGGGSRRSGGGSRHGGCSGGSRWRRIGIGILGFRHSVRKLGCKVVQMAVGKNKRISKGKKGGKKKATDPFTKKDWYDIKAPSVFQVKNVGKTLVTRTQGTKIASDGLKHRVFEVSLADLQGDEDHAFKKIRLRAEDVQGKNVLTNFWGMDFTNDKLRSLVRKWQTLIEAHADVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQVRQIRRKMREIMINQATSCDLKELVRKFIPEMIGKEIEKATSSVYPLQNVFIRKVKILKAPKFDLGKLMEIHGDYSEDIGTKVERPVAETMVEGATEVVGA 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01249 418 ProSitePatterns Ribosomal protein S3Ae signature. 218 230 IPR018281 GO:0003735|GO:0005840|GO:0006412
Phco7g01249 418 Pfam Ribosomal S3Ae family 173 378 IPR001593 GO:0003735|GO:0005840|GO:0006412
Phco7g01249 418 SMART Ribosomal_S3Ae_2 172 378 IPR001593 GO:0003735|GO:0005840|GO:0006412
Phco7g01249 418 Hamap 40S ribosomal protein S1 [RPS3A]. 158 415 IPR027500 GO:0003735|GO:0005840|GO:0006412
Phco7g01249 418 PANTHER 40S RIBOSOMAL PROTEIN S3A 149 408 - -
Phco7g01249 418 MobiDBLite consensus disorder prediction 102 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01249 Phco-Chr7 11084141 11088512 Transposed