Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01220 ATGGAAATAGACATGGACTACCACACAGATACAATCCACAACCTCCACTTCTCTGGATACGCTACCATCACCGACACCACCCCCTCTTCCGACGACGACTACGGTTGCAACTGGAACCACTGGTCCCCCCTCGTCAACTGGGATGCCTTCACCGGACCCCACGATGACTTCCACCACCTCATCGACTCCATCGTCTCTGACGGCGCCACCGCCGAGTACCCCAGCCCCGACGACCACGCCGCCAGCAACTCCCCTTCCCCCTCCATAACGGAGGAAGACGACGCCGAGGAACAAACAGCCGCCGCCGACGATTCCAAGGGCCTGAGACTAGTCCATCTGCTTATGGCCGCCGCGGAGGCCCTTACTGGAGCCACCAAGAGTCGCGACCTTGCTCGAGTAATATTGGTTCGGCTCAAGGATCTGGTGTCTCACGCGGCGCACGGCTCCAACATGGAAAGGCTCGCCGCCTACTTCACCGACGCACTCCAGGGCCTGCTAGAAGGCGCCGGGGGTGCGCACAATAACAGCAAACATCACTACTACATCACGTGTGGGTCCCACCACCCCCGCGATGATCATCATCAAAACGACACCCTCGCGGCGTTCCAAATGCTCCAGGACATGTCTCCCTACATCAAGTTCGGACATTTCACCGCCAACCAGGCCATCCTCGAGGCCGTGGCCCACGAGCGCCGAGTCCACATCGTAGACTACGACATCATGGAAGGGGTCCAGTGGGCTTCTCTCATGCAGGCCCTTGCCTCCAACAAAACAGGTCCACCGGGCCCACACCTCCGAATCACCGCATTGTCCCGAACCGGCACCGGACGCCGCTCCGTCGCTACCGTGCAGGAGACAGGGAGGCGATTAACGGCGTTCGCCACTTCCCTTGGGCAGCCGTTCACGTTCCACCAGTGCAGGTTGGATCCCGACGAAACGTTTAAACCTTCGTCTTTGAAGCTGGTTCGCGGAGAGGCTTTGGTTTTTAACTGCATGTTAAACTTACCGCACCTGAGTTACCGCGCGCCCGATTCTATTGCGTCATTTTTGAGTGGGGCGAAAGAGTTGAAGCCGAAGTTGGTGACTTTGGTGGAGGAAGAGGTGGGGTCCAGTGTGGGAGGGTTCGTGGGAAGGTTCATGGACTCGCTGCATCACTACTCGGCGGTGTTTGACTCGCTGGAGGCTGGGTTTCCGATGCAGGGACGCGCCAGGGCTCTTGTGGAGCGAGTTTTCTTGGGCCCAAGGATAGTAGGGTCGCTGGCCCGGATCTATCGGACGGGTGAAGAGCTGCAGGACAGAGGGTCGTGGGGGGAGTGGTTGGGTGCGTCGGGGTTCAGGGGAGTCCCCATGAGCTTCGCCAATCATTGCCAAGCGAAGCTTCTACTGGGTCTTTTCAACGACGGTTATCGGGTAGAGGAGTTGGGGCCTAATAAGTTGGTGTTGGATTGGAAATCTCGGCGCTTGCTTTCTGCCTCGCTTTGGACTTCTTCTTCCTCCGACTCCCATTAA 1509 0.5845 MEIDMDYHTDTIHNLHFSGYATITDTTPSSDDDYGCNWNHWSPLVNWDAFTGPHDDFHHLIDSIVSDGATAEYPSPDDHAASNSPSPSITEEDDAEEQTAAADDSKGLRLVHLLMAAAEALTGATKSRDLARVILVRLKDLVSHAAHGSNMERLAAYFTDALQGLLEGAGGAHNNSKHHYYITCGSHHPRDDHHQNDTLAAFQMLQDMSPYIKFGHFTANQAILEAVAHERRVHIVDYDIMEGVQWASLMQALASNKTGPPGPHLRITALSRTGTGRRSVATVQETGRRLTAFATSLGQPFTFHQCRLDPDETFKPSSLKLVRGEALVFNCMLNLPHLSYRAPDSIASFLSGAKELKPKLVTLVEEEVGSSVGGFVGRFMDSLHHYSAVFDSLEAGFPMQGRARALVERVFLGPRIVGSLARIYRTGEELQDRGSWGEWLGASGFRGVPMSFANHCQAKLLLGLFNDGYRVEELGPNKLVLDWKSRRLLSASLWTSSSSDSH 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01220 502 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 94 490 IPR005202 -
Phco7g01220 502 Pfam GRAS domain family 110 495 IPR005202 -
Phco7g01220 502 ProSiteProfiles GRAS family profile. 101 495 IPR005202 -
Phco7g01220 502 MobiDBLite consensus disorder prediction 68 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01220 Phco-Chr7 10686424 10687932 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco7g01220 GRAS 5.9e-100 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01220 7 10686424 10687932 Phco7g01220 7 10686424 10687932 ECH