Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01210 ATGGATGGGAAGCCTAACCCGGATTCCTCCTCCCCGGACTTCCTCCGCCACGTTCAAGCCGCCTTGAAACGACACCGTCCCCTCGGTTCAATGCAGTCCAATAGCATAAGGCCAAGGCGCACGCTGCTTCCACAACGAAAGCTGTCAAACACGCCATCCGATTCCACCAAATCTCAAGAACAAGCTTCTTCCATGGTCTCACTCAACACCGTCGTCCCTACCCAAAACCTAGATGCGCAGAAGAAAGTTCAGTTTTCAGTTCCCACGAATTCTACTGCTCAGGATGCTAAGGCCACCACTGAGTTGGAGAATTTATCGTCTCACATGGGTTCGCTTGGATTCGCAGAAATGGAGTGGGTTGAAGGCAACCAAATTGAAGCATCGTCATCATTGCTTGAATGCAACCAGAAGGAGGATGTTCAGAAGGCTGGCTTTGACGCGAGTTTGAGATGTGATAGTGGAGTGAGTTCGGTGTTGCCAAAGAGAAGTGTGGTTACTCAGGATCATTTGCAGCAATTCAGTAGTTTTTTGAGTCAGCCAGCTACGCAGTCTTCGGTTTTGGGACCGTCATGTGCTACAACCACCTCAGTTAATTCAACTTCGGCACCTATGCTAAATTCAACAACACGCTATTCTCACTCGCATCTAGAAGGTGGCTCAAATGTGACTGCTGAGCCTTTTGGGGAGGTTAATGCTAACCCTCCTCCTGTAACTGAAGGGTTTGTGAAATCAGTTAATGTTTTCCAAAAGGAAACCAACAGAATGTTGGTGGATCGGGGGGCAGAAGCTGAAGTCCAAGCTTCTGGTCCTAGTATTTCTGATGCAGAGTTGGCGTCTAAGAAGAGCAATCGATCTAAGGAGCAACAAGGGAGTGTGTTGAAAGAATCTGGAGATTCTAAATATACTTGGGATGATGGTAAAGGGAAAGAGGCTGTGGATGTTGCCACTATACAACCGTTGGCTCTACCTTCAACAACCACAACCACATCTTTAGATGCGAAGTTGGAGTCTTCTAAGGTAGAAAGACGAGAGAAGATTGCAAGTAGTAAAGGTGCATCAGCTGCCCGTAAAAGGACTTATGATCCTGATTTGTTTTTCAAAGTTAATGGAAAGCTTTATCAACGTCTTGGCAAGATAGGTAGTGGTGGAAGCAGTGAGGTACACAAAGTGATTTCATCGGACTGTAGGATATATGCCCTTAAAAAGATCAAGCTCAAGGGTCGTGATTATGCTACTGCATTTGGGTTTTGTCAAGAGATTGAGTATCTGAATAGGCTAAAGGGAAAGGATAACATCATACAGCTCATAGATTATGAGGTGACAGACAAGGCTTTGCTTGAGGAAGTTATGAAAGGCTCCTTCAGTAATAAAGATGGCCGGGTCAAGGATGATGGATGTATATACATGGTACTTGAATATGGAGAAATTGATTTGGCTCACATGTTGTCTCAGAAGTGGAAGGAACTGGATGGAAGCCACCAGACCATAGATGAGAACTGGCTTCGATTTTATTGGCAGCAAATTCTTCTAGCTGTCAACACTATTCATGAGGAACGGATTGTGCACTCAGACTTGAAGCCAGCTAACTTCCTTCTTGTCAAAGGTTCCCTAAAACTAATTGATTTTGGTATAGCCAAAGCAATAATGAATGACACAACCAACATCCAACGGGATTCACAGGTGGGTACACTAAGTTACATGTCTCCAGAGGCATTTATGTGTAATGAGACTGATGCAAATGGAAACATCATAAAGTGTGGCCGGTCATCAGATATCTGGTCCCTGGGCTGCATCCTTTATCAAATGGTATATGGGAGAACACCTTTTTCTGATTACAAGACATTTTGGGCCAAATTCAAAGTCATAACAGATCCAAGTCATGAAATTACGTATGAACCAGTTTCAAATCCATGGCTTTTGGATCTTATGGTGAGGTGTCTAACATGGGATCGCAATCAAAGGTGGAGAATACCTCAGCTACTCCAACATCCTTTTCTTGTTCCTCCTGTACCATCTCATCCATCATTGCCCCAGGATAATAATAGTTGTGAATTGCTACAACATATTTCTGAAACTTGTACATATGACCCAGAGGTATCTGAACTGTGTAGTCAGCTCCAACGGCTTCTTAGCGATCCAGTCGATAAAACAACTCACTCACTACATTCACGAGATCAACAACTAAAACTGCTGTCCCAAATGTCAGATCTATGTATTCAGCTGCATGAACGTTTGAGAAATACTGGAAGCAAGTAG 2256 0.4393 MDGKPNPDSSSPDFLRHVQAALKRHRPLGSMQSNSIRPRRTLLPQRKLSNTPSDSTKSQEQASSMVSLNTVVPTQNLDAQKKVQFSVPTNSTAQDAKATTELENLSSHMGSLGFAEMEWVEGNQIEASSSLLECNQKEDVQKAGFDASLRCDSGVSSVLPKRSVVTQDHLQQFSSFLSQPATQSSVLGPSCATTTSVNSTSAPMLNSTTRYSHSHLEGGSNVTAEPFGEVNANPPPVTEGFVKSVNVFQKETNRMLVDRGAEAEVQASGPSISDAELASKKSNRSKEQQGSVLKESGDSKYTWDDGKGKEAVDVATIQPLALPSTTTTTSLDAKLESSKVERREKIASSKGASAARKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCRIYALKKIKLKGRDYATAFGFCQEIEYLNRLKGKDNIIQLIDYEVTDKALLEEVMKGSFSNKDGRVKDDGCIYMVLEYGEIDLAHMLSQKWKELDGSHQTIDENWLRFYWQQILLAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMNDTTNIQRDSQVGTLSYMSPEAFMCNETDANGNIIKCGRSSDIWSLGCILYQMVYGRTPFSDYKTFWAKFKVITDPSHEITYEPVSNPWLLDLMVRCLTWDRNQRWRIPQLLQHPFLVPPVPSHPSLPQDNNSCELLQHISETCTYDPEVSELCSQLQRLLSDPVDKTTHSLHSRDQQLKLLSQMSDLCIQLHERLRNTGSK 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01210 751 MobiDBLite consensus disorder prediction 28 66 - -
Phco7g01210 751 CDD PKc_Mps1 371 666 IPR027084 -
Phco7g01210 751 ProSitePatterns Protein kinases ATP-binding region signature. 379 401 IPR017441 GO:0005524
Phco7g01210 751 MobiDBLite consensus disorder prediction 261 305 - -
Phco7g01210 751 SMART serkin_6 373 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01210 751 ProSiteProfiles Protein kinase domain profile. 373 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01210 751 FunFam serine/threonine-protein kinase mph1 isoform X2 366 453 - -
Phco7g01210 751 SUPERFAMILY Protein kinase-like (PK-like) 367 676 IPR011009 -
Phco7g01210 751 MobiDBLite consensus disorder prediction 1 66 - -
Phco7g01210 751 Gene3D Transferase(Phosphotransferase) domain 1 487 668 - -
Phco7g01210 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Phco7g01210 751 Pfam Protein kinase domain 373 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01210 751 PANTHER MIXED LINEAGE PROTEIN KINASE 39 699 - -
Phco7g01210 751 FunFam serine/threonine-protein kinase mph1 isoform X1 485 669 - -
Phco7g01210 751 Gene3D Phosphorylase Kinase; domain 1 366 452 - -
Phco7g01210 751 MobiDBLite consensus disorder prediction 279 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01210 Phco-Chr7 10569760 10573065 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Phco7g01210 Pkinase 1.4e-54 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01210 7 10569760 10573065 Phco7g01210 7 10569760 10573065 ECH