Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01209 ATGAAGAGCGCAGAGGTACCGTCCTTCGACATAGCAATGGAGAATTTGCAAAGTGCTCTAAAAGATTGTAGCTTATCAGTTTCCACCGTCCCAGAAAAGGGTCGTTCTCTCTTCGCTACAAGGGATTTCTATCCAGGGGATGTGATCATAGGCCAAGAGCCTTACGTTTGTGTTCCAAACAACTCCTCACTTTCCACCCCCAAAAGGTGTGATGGATGTTTCACTACATCTAATATCCTTAGAAGGTGCTCACGTTGCCACATTGCATACTATTGCAGAACCGCGTGTCAGAGGTCAGAGTGGAAGCTGCATCGTCTTGAGTGTGAGGTCCTCTCAAGGCTTGACAAGGACAAGAGAGAATCTGTCACACCATCTATACGGCTGATGGTGAGACTTTATCTGCGGAGGAAGTTGCAAGATGATAAGGTCATCTCAAGTACTGCTATGGACAACTACAACTTAGTGGAGGCATTAGTGGCTCACATGTCTGATATCACAGAAGAGCAGCTGGTGCTTTACGCACAGATGGCAAATCTTGTATATTACATATTACACTGGCCGGAAATCAATATAAAAGAGATTGCAGAAAATTTTTCTAAGTTTGCATGTAATGCTCATACTATTTGTGACAGTGAGTTAAGACCTGTGGGAACAGGATTGTATCCCGTCATTTCTATTATCAATCATAGTTGTTTGCCCAATTCTGTGTTGGTTTTTGAGGGAAGGTCAGCATTAGTACGTGCTGTGGAACATATACCCATAGGTACTGAGGTACTGATAAGTTATATAGAGACTGCTGGAAGCACAATGACTCGACAGAAGGCTCTCAAAGAGCAGTACCTATTCACTTGTACATGTCCCCGCTGTTCTAAAGTGGGTCAGAATGATGATACACAAGAAAGTGCAATTTTAGAAGGATATAGATGCAAAAGTGAAAAATGTGGTGGTTTCTTGCTTCAAACAACTGATGGGAAAGGATTTCAATGCCAAGGTTGTCAACTAGTTATGGGCACGGAGGAGATAAAGGAAATTATAACTGAAATTGAATTGCTATCTGAAGAAGCAGCTTCGAAGTCTTCTTTCTCTTGCGGTTATCAAGTTATTTCCATATATAAAAAGATTGAGAAACTGGAAACAGAACTATATCATCCTTTCTCAGTTAGTTTGATGCAAACTCGGGAGAAGATTTTGAAGTCATTAATGGAGCTGGAACACTGGACAGAAGCTTTAGCATATTGCAAATTGACCATTCCATTTTATGAAAAAGTGTATCCATCTGTTCACCCTCTGCTTGGCTTGCAGTATTATACTTGTGGAAAACTAGAATGGTATTTGGGAGAGACAGAGGAAGGTGTTAAATCACTGACGAAGGCGGTGGATATACTACGGATTACTCATGGCACAAATACACCTTTCATGAAGGACCTCTTGATGAAATTGGAAGAAGCCCGTGCTGAAGCCTCTTACAAATTCTCCTCCTTAGACAGCTAG 1491 0.4158 MKSAEVPSFDIAMENLQSALKDCSLSVSTVPEKGRSLFATRDFYPGDVIIGQEPYVCVPNNSSLSTPKRCDGCFTTSNILRRCSRCHIAYYCRTACQRSEWKLHRLECEVLSRLDKDKRESVTPSIRLMVRLYLRRKLQDDKVISSTAMDNYNLVEALVAHMSDITEEQLVLYAQMANLVYYILHWPEINIKEIAENFSKFACNAHTICDSELRPVGTGLYPVISIINHSCLPNSVLVFEGRSALVRAVEHIPIGTEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCSKVGQNDDTQESAILEGYRCKSEKCGGFLLQTTDGKGFQCQGCQLVMGTEEIKEIITEIELLSEEAASKSSFSCGYQVISIYKKIEKLETELYHPFSVSLMQTREKILKSLMELEHWTEALAYCKLTIPFYEKVYPSVHPLLGLQYYTCGKLEWYLGETEEGVKSLTKAVDILRITHGTNTPFMKDLLMKLEEARAEASYKFSSLDS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01209 496 Gene3D SET domain 36 289 IPR046341 -
Phco7g01209 496 SUPERFAMILY SET domain 22 262 IPR046341 -
Phco7g01209 496 Gene3D Tetratricopeptide repeat domain 416 492 IPR011990 GO:0005515
Phco7g01209 496 ProSiteProfiles SET domain profile. 23 263 IPR001214 GO:0005515
Phco7g01209 496 Pfam SET domain 34 262 IPR001214 GO:0005515
Phco7g01209 496 Gene3D - 69 120 - -
Phco7g01209 496 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 26 482 - -
Phco7g01209 496 Pfam MYND finger 70 108 IPR002893 -
Phco7g01209 496 SMART set_7 23 269 IPR001214 GO:0005515
Phco7g01209 496 ProSiteProfiles Zinc finger MYND-type profile. 70 108 IPR002893 -
Phco7g01209 496 ProSitePatterns Zinc finger MYND-type signature. 70 108 IPR002893 -
Phco7g01209 496 Gene3D - 121 205 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phco7g01209 SET 9.6e-13 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01209 7 10561361 10567651 Phco7g01209 7 10561361 10567651 ECH