Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phco7g01196 | ATGCTCTGCTTCCTGTGTACCTTGTTGTTGCCGGCGATGACCGGGGACCGATGTCACCCGTTGAAGGACATGGCGGAGGGAGGGGATGCCGCCGCCGTGGGGAGGCCCTATCGGTCTGACTTTGTGACGGAAATTACTCGTGATTCTGCTGTACGTACAATTGATTACTTGTCCCAGGCTAGGAAAGCGCTCGCTGAGCGTTCCCCATTTGATGTTGCCGAAGAAACTTCGACTTCTGCTGTGCTTACTCTGCCCAGTGGGTTGGCTGGCCTGCTGAACCGACAGACTGATAACAGGAGACGTCCTAAGAAGTCCCATTCTGGTGGACATAAGAGGAAATCTTCGGCTAGGGCTAACCAGAAGAAGCCTGATGATTCTAACATTTGGATTGAGACTGAGGAGTACTTTAGGGACTTAACTTTGGCTGATATTGATACCTTGTTTGAGTTCTCTCGTGCAACTAGTTTAGCTTCTCAGGAATTGGGAAATGCTCCAAGTTACAATGCAGTTACTAGTTATATCAGGAATGAAATGGAACCTGTTCCAAGATTCAATGCAGGAGTCAGCAGTGAGGATGAAAAGAAGGGTGACTTAGTGGGTAGTGAGGATGCAAAGAAGGTTGGTGAAGCTGTGGAAAATGAGGATGAATTGTTGGTAATTGAGGCAATTGACGAAGCTGCTGTTGAACAAGCTTGTCCTCAGGATGACAAGAATCAAGATATTTCTGATTCTGCTATTAGTTTAGAGTGGTTTTTAGGTTGTAGGAATAAACTCTCTTTGACTTCTGAGCGCCCCTCTAAGAAAAGGAGGCTTTTGGGTGTTGAAGCTGGTTTGGAGAAAGTTATAATGACTTGTCCTTGTGATGAGGGTCAACTGTTTTGCCATTACTGTGGAAGGGGAGACATTGGCAGGGACTCCAATAGGTTAATTGTCTGCACTTCTTGTAAAATGGCAGTTCACCGTAAGTGCTATGGTGTGGTTGATGATGTAGATGAGACTTGGCTGTGCTCCTGGTGCAAGCAAATGGGTGATGTTGATGAATCAGTGAATCCTTGTGTTCTTTGTCCAAAGAAGGGTGGTGCATTAAAACCAGTTAATAGCAGTGTGGAAGGTGCTGGTTCTGCCCCATTTGTGCACTTATTTTGCTCTCTGTGGATGCCTGAGGTTTATGTAGATGATTTGATGAAGATGGAACCTGTTATGAATGTGGGGGAAATCAAGGAAACCCGGAAGAAATTAGTTTGTAGTGTTTGCAAAGCAAAGTGTGGTGCATGTGTTCGGTGCAGCCATGGAAGCTGCAGAACTTCTTTCCACCCTTTATGTGCAAGGGAAGCTAGACATAGGATGGAAGTTTGGGCAAAGTATGGTAATGATAATGTTGAGTTGCGGGCTTTTTGCTTTAAACACTCAGATCTACCCGAGAGTAGAAGCATCTTGCCACAGGAAGGCTTTATTGAGGTTAGAAATGAATTTTCTGAAGCCAATGACCTTCCAGTGACATTGCCAGTGAGTGGTGAACACAACTTGCGAGATTGCAGGAATGGAGGATTAGTCTCTGACAGTAATCCAGACAAATTGAACCATAATGACGAACCACCGGATGGAGGATTACCTGATTGCAGGTTAAGTGCTCACATGTTGGGATGTGGTGCTCTGCCCCAACAAAATGTTGAAGTGGTAGGGAGAGGGAATGAGAATGTTGATGCATCTGATTCTCTTAGCTTTGCTCTAGTTTTGAAGAAGTTGATTGATCGAGGAAAAGTTAACGTAAAAGACGTAGCATTGGAGATTGGCATTTCACCAGATACATTAACTGCAAATACAAATGAAGCTTATATGGCCCCTGATGTCCGACACAAAATAGTGAATTGGCTAAAAGGCCATGTATATACCAGTGCATTTCAGAAGGGTTTAAAGGTCAAATTCAAACCAGCCAATGCATCCAAAATTGATAGTGGAGCCCCAGATGGCTCTGATATTTTACCAATATCAGACTCGGGTTTGCTGGATCCTGTTGCTGTTAAGTCAGTTCCACCAAGGAGGAGAACAACCAATAACATTAGGATTTTGAAGGATAATAAAGTGATATGTCCATCTGAGGGGGTTACAAGTGAGAATGGGATGCCAGTGCATGTGTGTAGAGTTGGTCAGTCCAACTGTGAGAATCCAACAAGTTCTAATGAAGCATCCATCCCCGATGTAACTGAAATGAACTTACCCAAGTCTGAGGATATTTTTCATGAAGTTCAAGGGAATGATGATAAACCTCACAAATCCTGCTTATCTGGAAAGGGTGCAGTCTCTAGTTACATTCATCCATTCATCAACAAGAAATTGCCGCAGCTTGGGGTGCCATTGGAGGATGTTATATGTTCAAGTGACAAGAAAAATTCGGGTTTGGTTGAATCCTTTGGGGCTAGTGGCTGCTCAAATAGCCAAAATCAGAATTTAACTTGCAGTGAAATATCAAAGCCTGATGCAGTAAAGAAAGAGCAATTGGTTAGAAGTAAAGAAATGGAACTCTCGGAATTTTCTCCTCAAGATGAATTGGAAGGGGAACTTGTTTATTTTCAGTATAGGTTATTGCAGAATGTGGTTGCAAAAAGGAGGCATATTGATAATTTAATCTACAGTGTTGCCAAGAGTTTACCTCATGAGATTGATAGGGCACATCAACAAAGATGGGATGATGTTATTGTTAATCAATATCTACGTGATCTTAGAGAGGCAAAAAAGCAGGGAAGAAAAGAAAGAAAGCACAAGGAAGCACAGGCAGTACTGGCTGCTGCAACTGCTGCTGCGGCAGCATCTTCTAGGTCATTCCGGAAAGACACCTTAGATGAATCTATGCAACAGGAGAATTTATTAAAATCGGACAATTTAAACGGAAGGACGGGTGCTTGTTCTCAACCAATGCCTCGAGCCAAAGAGACACTTTCAAGAGTAGCTGTGACTAGAACTTCATCAGAGAAATATTCAGATTTTTGCATGCCAACCTCAGATTTTTCTAAGGAGCAATGTAAATCATGTGATATTTGTAGACGGTCAGAGACTATTTTAAACCCTGTCCTAGTCTGCTCTGGTTGCAAGGTTTCAGTTCACTTAGATTGCTATCGTAGTGTGAAAGAAACAACAGGTCCGTGGTACTGTGAGTTATGTGAAGAAATGTCATCTAGAAGCTCTGGGGCATCTGCTATCAACTTTTGGGAGAAACCTTATATTGGCGTAGAATGTGCTCTCTGTGGCGGTACTACTGGTGCTTTTAGGAAGTCTTCTGATGGTCAATGGATTCATGCTTTCTGTGCTGAGTGGGTTTTTGAGTCTATGTTCAGAAGAGGACAAATAGATGCTGTTGAAGGAATGGAAAGTGTGCGAAAAGGAGTTGACATTTGTTGCATCTGCCATTGCAAAAATGGTGTATGCATGAAGTGTTGCTATGGGCATTGTCAGACCACATTCCATCCATCATGTGCTAGAAGTGCTGGTTTGTACATGAATGCGAGGACTGCTGGTGGCAAGGTTCAACACAAAGCTTACTGTGAAAAGCATAGTTTGGAGCAAAAAGCAAAGGCTGAAAATCAAAAACATGGAATTGAAGAGTTAAAAAGTATCAGGCAAATTAGGGTTGAACTAGAGAGATTGCGTCTCCTTTGTGAAAGAATTGTCAAACGTGAAAAAATAAAGCGGGAATTGGTACTATGTTCACATGACATACTGGCCTTTAAAAGAGATAATGTTGCGAGGTCTGTGCTAGTTCATAGCCCTTTCATCCTTCCTGATGGTAGTTCAGAATCAGCTACAACGTCCCTAAAAGGGAACACAGATGGATATAGATCATGCAGTGAACCACTCCAAAGATCAGATGATGTTACTGTTGACAGTTCTGTTTCTGCTAAGCACCGTGTCAGAGTCGCCATATCTATGGATGCAGACCCAAAATTGGATGATGACTGCTCAACCTCCCAAAGCAAATATAACCACAAGATTCCAGAAAGAACACAATTTTCTGGCAAGAAGATTCCTCATAGAGCTGCTGCATCACGAAATATTTTGGATGAAGGTGGATGGAGATCCAAATCTAGAAAGCATGCTGAAACATTTGGAAAAGAGCTTGTTATGACGTCAGATGAAGCATCTATGAAGAATTCGATGCTACCAAAAGGATATGCATATGTTCCTGCTGATTGTCTGTCAAATGACAAGAACTCTAACGAGGATATATATGCTAGTGGGCCTGTGGACAGGTAG | 4248 | 0.4268 | MLCFLCTLLLPAMTGDRCHPLKDMAEGGDAAAVGRPYRSDFVTEITRDSAVRTIDYLSQARKALAERSPFDVAEETSTSAVLTLPSGLAGLLNRQTDNRRRPKKSHSGGHKRKSSARANQKKPDDSNIWIETEEYFRDLTLADIDTLFEFSRATSLASQELGNAPSYNAVTSYIRNEMEPVPRFNAGVSSEDEKKGDLVGSEDAKKVGEAVENEDELLVIEAIDEAAVEQACPQDDKNQDISDSAISLEWFLGCRNKLSLTSERPSKKRRLLGVEAGLEKVIMTCPCDEGQLFCHYCGRGDIGRDSNRLIVCTSCKMAVHRKCYGVVDDVDETWLCSWCKQMGDVDESVNPCVLCPKKGGALKPVNSSVEGAGSAPFVHLFCSLWMPEVYVDDLMKMEPVMNVGEIKETRKKLVCSVCKAKCGACVRCSHGSCRTSFHPLCAREARHRMEVWAKYGNDNVELRAFCFKHSDLPESRSILPQEGFIEVRNEFSEANDLPVTLPVSGEHNLRDCRNGGLVSDSNPDKLNHNDEPPDGGLPDCRLSAHMLGCGALPQQNVEVVGRGNENVDASDSLSFALVLKKLIDRGKVNVKDVALEIGISPDTLTANTNEAYMAPDVRHKIVNWLKGHVYTSAFQKGLKVKFKPANASKIDSGAPDGSDILPISDSGLLDPVAVKSVPPRRRTTNNIRILKDNKVICPSEGVTSENGMPVHVCRVGQSNCENPTSSNEASIPDVTEMNLPKSEDIFHEVQGNDDKPHKSCLSGKGAVSSYIHPFINKKLPQLGVPLEDVICSSDKKNSGLVESFGASGCSNSQNQNLTCSEISKPDAVKKEQLVRSKEMELSEFSPQDELEGELVYFQYRLLQNVVAKRRHIDNLIYSVAKSLPHEIDRAHQQRWDDVIVNQYLRDLREAKKQGRKERKHKEAQAVLAAATAAAAASSRSFRKDTLDESMQQENLLKSDNLNGRTGACSQPMPRAKETLSRVAVTRTSSEKYSDFCMPTSDFSKEQCKSCDICRRSETILNPVLVCSGCKVSVHLDCYRSVKETTGPWYCELCEEMSSRSSGASAINFWEKPYIGVECALCGGTTGAFRKSSDGQWIHAFCAEWVFESMFRRGQIDAVEGMESVRKGVDICCICHCKNGVCMKCCYGHCQTTFHPSCARSAGLYMNARTAGGKVQHKAYCEKHSLEQKAKAENQKHGIEELKSIRQIRVELERLRLLCERIVKREKIKRELVLCSHDILAFKRDNVARSVLVHSPFILPDGSSESATTSLKGNTDGYRSCSEPLQRSDDVTVDSSVSAKHRVRVAISMDADPKLDDDCSTSQSKYNHKIPERTQFSGKKIPHRAAASRNILDEGGWRSKSRKHAETFGKELVMTSDEASMKNSMLPKGYAYVPADCLSNDKNSNEDIYASGPVDR | 1415 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phco7g01196 | 1415 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1074 | 1185 | IPR013083 | - | |
Phco7g01196 | 1415 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 346 | 472 | IPR013083 | - | |
Phco7g01196 | 1415 | MobiDBLite | consensus disorder prediction | 954 | 975 | - | - | |
Phco7g01196 | 1415 | CDD | ePHD | 1078 | 1183 | - | - | |
Phco7g01196 | 1415 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 349 | 470 | IPR034732 | - | |
Phco7g01196 | 1415 | Pfam | PHD-finger | 307 | 340 | - | - | |
Phco7g01196 | 1415 | Pfam | PHD-finger | 1021 | 1054 | - | - | |
Phco7g01196 | 1415 | MobiDBLite | consensus disorder prediction | 1396 | 1415 | - | - | |
Phco7g01196 | 1415 | MobiDBLite | consensus disorder prediction | 92 | 124 | - | - | |
Phco7g01196 | 1415 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 285 | 344 | IPR013083 | - | |
Phco7g01196 | 1415 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 1075 | 1184 | IPR034732 | - | |
Phco7g01196 | 1415 | SUPERFAMILY | FYVE/PHD zinc finger | 1001 | 1055 | IPR011011 | - | |
Phco7g01196 | 1415 | ProSiteProfiles | Zinc finger PHD-type profile. | 1007 | 1056 | IPR019787 | - | |
Phco7g01196 | 1415 | ProSiteProfiles | Zinc finger PHD-type profile. | 291 | 342 | IPR019787 | - | |
Phco7g01196 | 1415 | PANTHER | PHD FINGER PROTEINS | 103 | 940 | - | - | |
Phco7g01196 | 1415 | MobiDBLite | consensus disorder prediction | 512 | 537 | - | - | |
Phco7g01196 | 1415 | Coils | Coil | 904 | 924 | - | - | |
Phco7g01196 | 1415 | SMART | PHD_3 | 1009 | 1054 | IPR001965 | - | |
Phco7g01196 | 1415 | SMART | PHD_3 | 293 | 340 | IPR001965 | - | |
Phco7g01196 | 1415 | SMART | PHD_3 | 414 | 470 | IPR001965 | - | |
Phco7g01196 | 1415 | SMART | PHD_3 | 1130 | 1184 | IPR001965 | - | |
Phco7g01196 | 1415 | MobiDBLite | consensus disorder prediction | 99 | 117 | - | - | |
Phco7g01196 | 1415 | SUPERFAMILY | FYVE/PHD zinc finger | 283 | 340 | IPR011011 | - | |
Phco7g01196 | 1415 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 945 | 1065 | IPR013083 | - | |
Phco7g01196 | 1415 | MobiDBLite | consensus disorder prediction | 1262 | 1284 | - | - | |
Phco7g01196 | 1415 | Pfam | PHD-zinc-finger like domain | 1076 | 1183 | - | - | |
Phco7g01196 | 1415 | Pfam | PHD-zinc-finger like domain | 351 | 469 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phco7g01196 | Phco-Chr7 | 10391179 | 10404882 | Dispersed/Proximal |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Phco7g01196 | zf-HC5HC2H_2 | 2.1e-24 | CL0390 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phco7g01196 | 7 | 10391179 | 10404882 | Phco7g01196 | 7 | 10391179 | 10404882 | ECH |