Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01172 ATGTCCTCATCTTTGTCGTCGTCAAATTCGCCGTGCGCCGCGTGCAAGATTCAGCGCCGGAAGTGCACGCAGGAGTGCGTGTTCGCGCCGTATTTTCCGCCGGACAACCCGCAGCGCTTTGCCTACGTGCACAAGGTGTTCGGGGCGAGCAACGTCGCCAAGCTTCTCAACGAACTCAACGCGGCGCAGCGCGAGGACGCCGTTAAGTCCCTCGCCTACGAGGCCGAGGCGCGTCTGCGGGACCCCGTCTATGGCTGCGTGGGTCTCATCTCCATCCTCCAGCACCGCCTCAAGCAGTTGCAGACCGAACTCCACCACGCCAAGAAGGAACTCGCCTCTTACATCGGACCCCACGCCATGCTTCCTCCTCCTCCGCCGCCTCCGCCGCAACCTCGCACTTTCTCTCTCTTTCCCTTCAAAACGGCACCTCCTCCTCCTCATCAGGATCTTTTTGCCTTCACGGACGACGGTGCTTCCGCTTCTCAGTCTTCTCACGCCGCCTTCAACCACCTTGCTGTTCTCTCGCCTACCCTCGCCGCTGATCACGCCTTCCCTCATGCACCCATCCACCCTCTCGCTCTTCCGCATCACCAACATCTAATGCTCTCCCCTATGCAATCCAAGCCCCAAACCGACCCTGGTAATCTTAACCTACTCGACACAATAGCACTCTCGTACTTAATTCTTGAGAATGGAAGGCAAAAGGGTGTAAAGAAGGAAGAGCAGAAAGAGGAAGGAAGGTGTGAGAGAGAGAGAGAAGGGTAG 765 0.5791 MSSSLSSSNSPCAACKIQRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELNAAQREDAVKSLAYEAEARLRDPVYGCVGLISILQHRLKQLQTELHHAKKELASYIGPHAMLPPPPPPPPQPRTFSLFPFKTAPPPPHQDLFAFTDDGASASQSSHAAFNHLAVLSPTLAADHAFPHAPIHPLALPHHQHLMLSPMQSKPQTDPGNLNLLDTIALSYLILENGRQKGVKKEEQKEEGRCEREREG 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01172 254 Coils Coil 90 110 - -
Phco7g01172 254 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Phco7g01172 254 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 162 - -
Phco7g01172 254 MobiDBLite consensus disorder prediction 233 254 - -
Phco7g01172 254 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01172 Phco-Chr7 10166460 10167770 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco7g01172 LOB 3.5e-42 No_clan