Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01122 ATGGGAAGATCTCCATGCTGCGATGAGAATGGCCTTAAGAAAGGTCCCTGGACTCCCGAAGAAGATCAAAAGCTGGTTCAGCACATTGAGAAACATGGCCATGGAAGTTGGAGAGCTCTCCCTAAGCTAGCCGGTCTCAACAGATGTGGAAAAAGTTGTAGGCTAAGGTGGACTAACTATTTAAGGCCTGATATCAAGAGGGGCAAATTTTCTCAAGAAGAGGAGCAAACAATTCTGCATCTCCATTCTATCCTTGGAAACAAATGGTCAGCAATTGCGACCCACCTTCCTGGTAGGACAGATAATGAGATCAAGAATTTCTGGAATACTCATTTAAAGAAAAAGTTGATTCAGATGGGTTTTGATCCAATGACTCACCAACCTAGAACTGACCTTGTTTCCAGCTTGCCATATCTGCTAGCTTTGGCCAACATGACAGACCTTGTGGATCATCAATCATTGGATGAACATGCTATGATGTTGCAAGCAGAGGCAGTCCAGCTGGCAAAGCTTCAATACCTTCATCATCTAATCCAATCCTCAAACTCCTTAAGCTCCAACTACTATGACCAAAATGCCACCACAGACAACATGAACAACATGGAACCTTTCACTTTGTTAAACTCAATCTCCAATGTGAAAGAGAATACAGTCATATTGCAACCGGATGCTCCTGCCTCATTTTCTCATGGCATTGCTAGTTCTCAACCACTCCACCACCAAAACGTGCTACCTCACCTTTTAGACCCACAAGTCTCTTTCAGTTCTCAATCATGTTTGAATAGTGAGATGGGTCAAGGTACTAACTTTGCAATGATAAGTCAAGGGGATCACACGGTTGATCATGACTCTTCCTGGATTATTCCATCTATTCCTCCGAATGCAATAGGTACATCAGCTAGCAATCCAGGAGATGCCAGCAGCAGCACTTCTAGCTATGGAGGAGGACCCCCATCTTATTGGCCTGAACTATTTTTTGAGGACCCCATCATGCCTGAGCTATCTTAG 1008 0.4385 MGRSPCCDENGLKKGPWTPEEDQKLVQHIEKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTDLVSSLPYLLALANMTDLVDHQSLDEHAMMLQAEAVQLAKLQYLHHLIQSSNSLSSNYYDQNATTDNMNNMEPFTLLNSISNVKENTVILQPDAPASFSHGIASSQPLHHQNVLPHLLDPQVSFSSQSCLNSEMGQGTNFAMISQGDHTVDHDSSWIIPSIPPNAIGTSASNPGDASSSTSSYGGGPPSYWPELFFEDPIMPELS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01122 335 MobiDBLite consensus disorder prediction 291 315 - -
Phco7g01122 335 CDD SANT 69 112 IPR001005 -
Phco7g01122 335 FunFam MYB-related transcription factor 13 66 - -
Phco7g01122 335 CDD SANT 16 61 IPR001005 -
Phco7g01122 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phco7g01122 335 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 241 - -
Phco7g01122 335 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phco7g01122 335 Gene3D - 11 67 - -
Phco7g01122 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phco7g01122 335 SMART sant 13 63 IPR001005 -
Phco7g01122 335 SMART sant 66 114 IPR001005 -
Phco7g01122 335 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phco7g01122 335 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Phco7g01122 335 FunFam Transcription factor MYB39 69 130 - -
Phco7g01122 335 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phco7g01122 335 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Phco7g01122 335 Gene3D - 69 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01122 Phco-Chr7 9542778 9544092 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phco7g01122 Myb_DNA-binding 6.6e-17 CL0123