Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01079 ATGAGGAAGAAAAGGAAAGGAAGCGAGACTGATGCGTCAGCGGATCTGCATGTTATTTTGTCTCCTAATCTTGGCTCTGCTTCGTCGAATTTGAAGTCCCATTACTCGCTAGAGGATTGTTCTAGGCTGAAGAAGAGGTGTTGTAAGGAGGAGGATGCTGCCACTGAGCCAGCTGCTTCCTTTAAAAGAAGACTTGCCGGCATTGCCACTGCCCCGCCTTGTGGGACGTCTTCGTTGATCACGCCGGGGCGAGGGCTCAAGAGGAAGATTGGATGCATTGATGTTGCTACCCAGATGGGCAGGAAGAAGAAGATTGAGGACGATTATGTGTCTGGTGAGACGATTGGGCAAGGCAAGTTTGGGTCTGTTTGGCTGTGTCGGTCCAGGGTTAGCGGAGCAGAATATGCATGTAAGACTCTGAGGAAGGGGGAGGAGACGGTCCACCGAGAGGTTGAGATAATGCAACACTTGTCCGGACATTCTGGGGTTGTGACACTACAAGCAGTTTACGAGGAAGCTGATTGTTTTCATCTTGTGATGGAATTGTGCTCTGGGGGACGACTCATTGATCGGATGGTTAAGGATGGTCCATATTCAGAACAGCGGGCTGCTAATGTACTCAAGGAAGTGATGTTGGTCATCAACTATTGTCATGACATGGGAGTTGTGCACAGAGATATCAAACCTGAGAATATACTGCTCACAGCTTCTGGGAAAATAAAGCTTGCAGATTTTGGCTTGGCCATGAGAATTTCAGAAGGTCAGAACTTGACTGGTTTGGCTGGAAGCCCTGCCTATGTTGCCCCCGAAGTATTGTTAGGAAGATACTCTGAGAAGGTGGATATATGGAGTGCTGGAGTGCTTCTGCATGCTCTGTTGGTTGGCAGTCTTCCATTTCAAGGAGATTCATTGGAAGCAGTTTTTGAGGCTATTAAGACCGTCAAATTAGATTTTCAAACTGGGATGTGGGAATCAATATCTAAACCTGCGCGAGATCTTATTGGGAGAATGCTGACAAGGGATATTTCAGCGAGGATTTCAGCTGATGAAGTACTTAGACATCCATGGATATTGTTCTACACGGCACATACATTGGCGATGCTTCCCATCAAAACAAAATTGAAGAACCAAATCGGTGCAACATGTCCACAGCATGTTGCTCTTCCTGAACCAGGGTTAGGAGGAAATAGGATAGATAATTACTCACTTAGCGAGGGTTCATTCTCCGAAAGTTGCACTTCAGAAGATGATCAGGATGAATGTGTGTTGATTGATGTGCTTGCCTCTGCAATTTCACATGTGAGGATATCTGAACCAAAGAGGAGCAGGGTGTGTGGTCCTACAGGTCCGATAGTTCAACAAGGTTCATCTAACATGAAGCCAAACAACCTTTGTAAAGCATTTTAA 1407 0.4613 MRKKRKGSETDASADLHVILSPNLGSASSNLKSHYSLEDCSRLKKRCCKEEDAATEPAASFKRRLAGIATAPPCGTSSLITPGRGLKRKIGCIDVATQMGRKKKIEDDYVSGETIGQGKFGSVWLCRSRVSGAEYACKTLRKGEETVHREVEIMQHLSGHSGVVTLQAVYEEADCFHLVMELCSGGRLIDRMVKDGPYSEQRAANVLKEVMLVINYCHDMGVVHRDIKPENILLTASGKIKLADFGLAMRISEGQNLTGLAGSPAYVAPEVLLGRYSEKVDIWSAGVLLHALLVGSLPFQGDSLEAVFEAIKTVKLDFQTGMWESISKPARDLIGRMLTRDISARISADEVLRHPWILFYTAHTLAMLPIKTKLKNQIGATCPQHVALPEPGLGGNRIDNYSLSEGSFSESCTSEDDQDECVLIDVLASAISHVRISEPKRSRVCGPTGPIVQQGSSNMKPNNLCKAF 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01079 468 PANTHER SERINE/THREONINE-PROTEIN KINASE 96 367 - -
Phco7g01079 468 Pfam Protein kinase domain 109 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01079 468 FunFam Serine/threonine-protein kinase PEPKR2 100 423 - -
Phco7g01079 468 ProSiteProfiles Protein kinase domain profile. 109 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01079 468 CDD STKc_CAMK 108 356 - -
Phco7g01079 468 SUPERFAMILY Protein kinase-like (PK-like) 106 375 IPR011009 -
Phco7g01079 468 SMART serkin_6 109 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01079 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Phco7g01079 468 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Phco7g01079 468 Gene3D Transferase(Phosphotransferase) domain 1 100 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01079 Phco-Chr7 9057362 9059591 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phco7g01079 Pkinase 8.7e-69 CL0016