Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01070 ATGCCTCACAGAACAACATACATTTTCCCGCGTCACTTCCCGGAGCGAGGGTTGGATGAATCTACCAAACAACTATTAGATCACGAGAAAAAGAAAATCGTCAACTCAATCAAACATGACACGTTTAGCGTCGAAAGCGGCACTCCGAAAAAACCGCTTCCGACTGAAGACAACGACGTCGTTCTCTCCTCCGCTAACCACTCCGCCGTCTCCGACCTGTTCGCCGCCGGCGACAAGTTCCGGACCGAACACAAGCAAATCGCTGCGTTCTGCGATTGGCTGGTCGACAAGAAAGTCAGCCACCACTGCGACGGCGACCTACTTCTTCAGCCGGAAACCACCATCAAGGACGCTGCCGTTCACCAGAGCTTCGACCGGCAGGTTTCGCTGCCGAGGCTATCAAGCGGGAGCAGCTATGCTGGAAGCTTGTTTTCTGGGACGACGTTTGATTGCAATTTTTCCAGCGACATTAAGGAGGAAACATCGTCGTCTCGCACACTCACTACTATCGCTGCGCCGAGGCACAAGGATGAGGAGGAAGAACAGGTCACGGAGAAGTTGGCGAAGAAGTCGAAAGAGAGCTACATCTTGCAACTCACGTTAGCGAGGAGGCTCAACTGTTTGGCTAGCCTCGTCACTGAACCTGTCCTCACTCCAGGAACCGAAACCTGGGATGCTGAATCCGTTTCTTATCGCCTATGGGTGAGTGGATGTTTATCTTACACGGACAAGATAGCTGACGGGTTTTATAACATATTGGGGATGAATCCATATCTTTGGGTGATGTGTAATGATGTCGAAGAAGGTAGAAGGATACCTACTTTGACTGCGCTAAAAGCAGTTGAGCCTAGCGAAACTTGTATGGAGGTGGTGCTTGTTGATAGACGCGAGGACTCTCGCTTGAAGCTGCTTCAAGATAAGGCGCAAGAGTTGTATTGTGCTTCTGAGAACACCTTGGTGTTAGTGGAACAGCTGGGAAAACTGGTAGCCATTTGTATGGGGGGTATGTTCCCGGTGGAGCAAGGCGATCTTCACAAGCGCTGGAAGTTGGTTAGTAAGAAGTTGAGGAATTTTCACAAGTGTGTTGTGCTTCCCATTGGCAGCCTGTCTACTGGGCTTTGTAGGCATCGGGCAATTCTTTTTAAGAGATTGGCAGATTACATAGGTTTGCCCTGTCGTATAGCTCGTGCTTGCAAGTACTGTGTTGCAGATCATAGATCCTCTTGTCTAGTCAATATTAAAGATGACAAACAGCTCTCAAGGGAGTATGTTGTCGACCTAGTTGGGGAACCAGGAAATGTCCATGGACCAGATTCCTCAATAAATGGAGCATATGTTTCTTCAATGCCTTCCCCGTTTCAAATTTGTCACTTAAAAGAATCACAATCACCTTATATGGAGGACATAGCAAGTTCTGAATCTGTAGGTTCCAATAACAGACCTGTTAATCCTGAAAATCTTCCATATTCAGGCTGCGGAAATAATGATCAACAAGCTAAAGAAACTGATTTGCTAAGAAGTTCCATTTATGCTTCAGTTGATCAAATCTGTGAAGTTACAGAACCATCTCCAGTTCCTTCTGGATTCGAAGGGAATGAGGATGAATGTGCAGTTCGTAGTTCGGTTTTGCCTACCATCCATGAAGATGATTCTAAAGCTCTTCATCCAGCCATCGAAGCATCACTACATCAATATCCAAGCGTTAACGAAGATGTAGTACAAGTACAAGAAATTTCCAACAATGAGATCATTGTAAATGGAAGTTCTGTGGTGAAAAGTAGTTTCAAGCGATCTATACTTGGTTCATCCAGCCAGTCAGAACTGAAACAGGTAGACAATATAATTGAAAACAAGGGTTGTTTACCTGCAGGGAATATTCCAAGATATGTGAATCTTGAACCATCACTTGCCATGGACTGGCTTGAGATATCATGGGAGGATTTACGAATTAAAGAGCGTGTTGGTGCTGGTTCATTTGGGACAGTGTACCGTGCTGAATGGCATGGATCGGATGTTGCAGTCAAGGTTTTAACAGTTCAGGATTTCCGTGATGATCAGTTGAAGGAGTTCCTGAGAGAGGTTGCAATTATGAAACGGGTTCGCCATCCAAATGTGGTGCTATTCATGGGGTCTGTTACCAAACGCCCCCATCTATCAATAGTGACAGAGTATTTGCCCAGGGGTAGTTTATACCGCTTGATATACAGACCAGCATCTGGTGAAATTCTGGATAAGAGGAGGAGGCTACGGATGGCTTTGGATGTGGCTAGAGGAATCAATTATCTCCACTGTCTTAAACCTCCAATTGTGCACTGGGATCTCAAATCCCCAAACTTGTTAGTGGACAAAAATTGGACTGTGAAGGTTTGTGATTTTGGATTGTCCAGATTTAAGGCAAACACTTGCATACCGTCCAAATCAGTTGCTGGAACACCTGAGTGGATGGCTCCAGAATTTCTTCGTGGAGAACCCTCCAATGAGAAATCTGACGTATACAGTTTTGGAGTTATCCTGTGGGAACTTGTGACCATGAAACAGCCATGGAGTGGACTTAGCCCTGCCCAGGTGGTTGGAGCTGTTGCTTTCCAGAATAGGAGGCTTGCTATACCTGCAAACATCTCCCCAGCATTGGCCTCCCTCATGGAATCTTGTTGGGCTGATGACCCTAGTGAGCGGCCATCATTTGGTAGCATAGTTGAGTCACTAAAGAAGCTGGTAAAATCTCCGGCAGAAGCTATAAAAATGGGAGATACATAG 2757 0.4599 MPHRTTYIFPRHFPERGLDESTKQLLDHEKKKIVNSIKHDTFSVESGTPKKPLPTEDNDVVLSSANHSAVSDLFAAGDKFRTEHKQIAAFCDWLVDKKVSHHCDGDLLLQPETTIKDAAVHQSFDRQVSLPRLSSGSSYAGSLFSGTTFDCNFSSDIKEETSSSRTLTTIAAPRHKDEEEEQVTEKLAKKSKESYILQLTLARRLNCLASLVTEPVLTPGTETWDAESVSYRLWVSGCLSYTDKIADGFYNILGMNPYLWVMCNDVEEGRRIPTLTALKAVEPSETCMEVVLVDRREDSRLKLLQDKAQELYCASENTLVLVEQLGKLVAICMGGMFPVEQGDLHKRWKLVSKKLRNFHKCVVLPIGSLSTGLCRHRAILFKRLADYIGLPCRIARACKYCVADHRSSCLVNIKDDKQLSREYVVDLVGEPGNVHGPDSSINGAYVSSMPSPFQICHLKESQSPYMEDIASSESVGSNNRPVNPENLPYSGCGNNDQQAKETDLLRSSIYASVDQICEVTEPSPVPSGFEGNEDECAVRSSVLPTIHEDDSKALHPAIEASLHQYPSVNEDVVQVQEISNNEIIVNGSSVVKSSFKRSILGSSSQSELKQVDNIIENKGCLPAGNIPRYVNLEPSLAMDWLEISWEDLRIKERVGAGSFGTVYRAEWHGSDVAVKVLTVQDFRDDQLKEFLREVAIMKRVRHPNVVLFMGSVTKRPHLSIVTEYLPRGSLYRLIYRPASGEILDKRRRLRMALDVARGINYLHCLKPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTCIPSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMKQPWSGLSPAQVVGAVAFQNRRLAIPANISPALASLMESCWADDPSERPSFGSIVESLKKLVKSPAEAIKMGDT 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01070 918 Gene3D Phosphorylase Kinase; domain 1 641 725 - -
Phco7g01070 918 CDD STKc_MAP3K-like 654 902 - -
Phco7g01070 918 PRINTS Tyrosine kinase catalytic domain signature 722 735 IPR001245 GO:0004672|GO:0006468
Phco7g01070 918 PRINTS Tyrosine kinase catalytic domain signature 763 781 IPR001245 GO:0004672|GO:0006468
Phco7g01070 918 PRINTS Tyrosine kinase catalytic domain signature 829 851 IPR001245 GO:0004672|GO:0006468
Phco7g01070 918 PRINTS Tyrosine kinase catalytic domain signature 873 895 IPR001245 GO:0004672|GO:0006468
Phco7g01070 918 FunFam Serine/threonine-protein kinase CTR1 727 912 - -
Phco7g01070 918 Pfam Ethylene-responsive protein kinase Le-CTR1 226 434 - -
Phco7g01070 918 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 202 907 - -
Phco7g01070 918 ProSitePatterns Protein kinases ATP-binding region signature. 654 675 IPR017441 GO:0005524
Phco7g01070 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 769 781 IPR008271 GO:0004672|GO:0006468
Phco7g01070 918 SMART serkin_6 648 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01070 918 SUPERFAMILY Protein kinase-like (PK-like) 626 901 IPR011009 -
Phco7g01070 918 ProSiteProfiles Protein kinase domain profile. 648 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01070 918 Gene3D Transferase(Phosphotransferase) domain 1 727 915 - -
Phco7g01070 918 Pfam Protein tyrosine and serine/threonine kinase 648 902 IPR001245 GO:0004672|GO:0006468
Phco7g01070 918 FunFam Serine/threonine-protein kinase isoform 1 638 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01070 Phco-Chr7 8840757 8847706 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Phco7g01070 PK_Tyr_Ser-Thr 9e-65 CL0016